> Ring finger protein, transmembrane 1 (RNFT1)
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UGID:1271599     UniGene Hs.531701     Homo sapiens (human)   RNFT1 Order cDNA clone, Links
Ring finger protein, transmembrane 1 (RNFT1)

Human protein-coding gene RNFT1. Represented by 280 ESTs from 108 cDNA libraries. Corresponds to reference sequence NM_016125.3. [UniGene 1271599 - Hs.531701]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001140080.1 PREDICTED: RING finger and transmembrane domain-containing protein 1 isoform 2 P. troglodytes 100.0 434
NP_057209.3 RNFT1 gene product H. sapiens 100.0 434
NP_084064.1 Rnft1 gene product M. musculus 91.9 394
NP_001084648.1 RING finger and transmembrane domain-containing protein 1 X. laevis 66.6 409
NP_998393.1 rnft1 gene product D. rerio 57.2 366
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_001109845.1 PREDICTED: RING finger and transmembrane domain-containing protein 1-like M. mulatta 98.2 434
XP_003912896.1 PREDICTED: RING finger and transmembrane domain-containing protein 1 P. anubis 97.8 400

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; liver; uncharacterized tissue; intestine; ear; pancreas; thyroid; bone marrow; lymph node; placenta; lung; vascular; adrenal gland; pituitary gland; nerve; mammary gland; stomach; kidney; embryonic tissue; bladder; muscle; skin; salivary gland; mixed; pharynx; mouth; uterus; cervix; trachea; lymph; blood; eye; prostate; heart; bone; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q23.1
UniSTS entry: Chr 17 RH98194
UniSTS entry: Chr 1 G42236
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_016125.3 Homo sapiens ring finger protein, transmembrane 1 (RNFT1), mRNA PA
BC088365.1 Homo sapiens ring finger protein, transmembrane 1, mRNA (cDNA clone MGC:111090 IMAGE:30390062), complete cds PA
AK098649.1 Homo sapiens cDNA FLJ25783 fis, clone TST06726 P
AK296197.1 Homo sapiens cDNA FLJ59255 complete cds, highly similar to Homo sapiens PTD016 protein, mRNA P
AK295162.1 Homo sapiens cDNA FLJ60541 complete cds, highly similar to Homo sapiens PTD016 protein, mRNA P
AK294806.1 Homo sapiens cDNA FLJ56682 complete cds, highly similar to Homo sapiens PTD016 protein, mRNA P

EST sequences (10 of 280) [Show all sequences]

AI017279.1 Clone IMAGE:1638575 testis 3' read A
AI138369.1 Clone IMAGE:1736447 testis 3' read P
BX112906.1 Clone IMAGp998E02623_;_IMAGE:281449 brain
CB134346.1 Clone L14ChoiCK0-12-H10 liver 5' read P
AA897441.1 Clone IMAGE:1466263 mixed 3' read A
AI362376.1 Clone IMAGE:1979864 stomach 3' read A
AI539784.1 Clone IMAGE:2205366 uterus 3' read A
Z30261.1 Clone HEF055 heart P
AL042903.1 Clone DKFZp434J1222 testis 5' read A
AL042904.3 Clone DKFZp434J1322 testis 5' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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