> Seryl-tRNA synthetase (SARS)
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UGID:1205443     UniGene Hs.531176     Homo sapiens (human)   SARS Order cDNA clone, Links
Seryl-tRNA synthetase (SARS)

Human protein-coding gene SARS. Represented by 1575 ESTs from 489 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1205443 - Hs.531176]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001148840.1 PREDICTED: serine--tRNA ligase, cytoplasmic isoform 9 P. troglodytes 100.0 513
NP_006504.2 SARS gene product H. sapiens 100.0 513
NP_001191908.1 Sars gene product M. musculus 98.6 511
NP_001080487.1 seryl-tRNA synthetase X. laevis 90.8 509
NP_001003882.1 sars gene product D. rerio 88.3 514
NP_608743.2 CG17259, isoform A D. melanogaster 79.0 500
NP_501804.1 Protein SARS-1 C. elegans 75.6 486
XP_001692030.1 seryl-trna synthetase C. reinhardtii 64.2 442
NP_198099.1 seryl-tRNA synthetase A. thaliana 62.5 450
XP_955965.2 seryl-tRNA synthetase N. crassa 61.4 476
NP_010306.1 serine--tRNA ligase SES1 S. cerevisiae 58.7 461
Other hits (2 of 61) [Show all]SpeciesId(%)Len(aa)
XP_001089358.2 PREDICTED: seryl-tRNA synthetase, cytoplasmic M. mulatta 99.1 458
XP_002715855.1 PREDICTED: seryl-tRNA synthetase isoform 2 O. cuniculus 99.0 513

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; uncharacterized tissue; lung; testis; skin; intestine; embryonic tissue; liver; uterus; blood; eye; muscle; mixed; prostate; kidney; connective tissue; lymph; mammary gland; heart; cervix; pharynx; ovary; adrenal gland; stomach; vascular; umbilical cord; salivary gland; thymus; ear; ascites; thyroid; bone marrow; adipose tissue; bladder; esophagus; pancreas; parathyroid; spleen; tonsil; pituitary gland; larynx; bone; lymph node; mouth; peritoneum; nerve; trachea; ganglia; amniotic fluid; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p13.3
UniSTS entry: Chr 1 SHGC-75275 [Map Viewer]
UniSTS entry: Chr 1 RH69912
UniSTS entry: Chr 1 RH36634
UniSTS entry: Chr 1 STS-W72396
UniSTS entry: Chr 1 RH28522
UniSTS entry: Chr 1 SHGC-35825 [Map Viewer]
UniSTS entry: Chr 1 D9S766
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 1 AL009498
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

NM_006513.3 Homo sapiens seryl-tRNA synthetase (SARS), transcript variant 1, mRNA PA
D49914.1 Homo sapiens mRNA for Seryl tRNA Synthetase, complete cds P
AK222677.1 Homo sapiens mRNA for seryl-tRNA synthetase variant, clone: CBR02289 PA
AK022339.1 Homo sapiens cDNA FLJ12277 fis, clone MAMMA1001711
X91257.1 H.sapiens mRNA for seryl-tRNA synthetase P
BC000716.1 Homo sapiens seryl-tRNA synthetase, mRNA (cDNA clone MGC:1285 IMAGE:3505218), complete cds PA
BC111398.1 Homo sapiens seryl-tRNA synthetase, mRNA (cDNA clone MGC:104285 IMAGE:4133889), complete cds PA
BC009390.2 Homo sapiens seryl-tRNA synthetase, mRNA (cDNA clone MGC:16732 IMAGE:4129592), complete cds PA
AK312771.1 Homo sapiens cDNA, FLJ93186, Homo sapiens seryl-tRNA synthetase (SARS), mRNA P
NR_034072.1 Homo sapiens seryl-tRNA synthetase (SARS), transcript variant 2, non-coding RNA A

EST sequences (10 of 1575) [Show all sequences]

AA968944.1 Clone IMAGE:1579121 mixed 3' read
AA887240.1 Clone IMAGE:1500358 lung 3' read A
AI003584.1 Clone IMAGE:1387900 parathyroid 3' read A
AA909936.1 Clone IMAGE:1540867 mixed 3' read
R18176.1 Clone IMAGE:30437 brain 5' read P
AI042174.1 Clone IMAGE:1668010 parathyroid 3' read PA
AI049861.1 Clone IMAGE:1699352 kidney 3' read
T06028.1 Clone HFBDN14 brain P
T06029.1 Clone HFBDN14 brain
AI073864.1 Clone IMAGE:1565934 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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