> Nuclear factor related to kappaB binding protein (NFRKB)
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UGID:1204806     UniGene Hs.530539     Homo sapiens (human)   NFRKB Order cDNA clone, Links
Nuclear factor related to kappaB binding protein (NFRKB)

Human protein-coding gene NFRKB. Represented by 210 ESTs from 127 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1204806 - Hs.530539]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_006156.2 NFRKB gene product H. sapiens 100.0 1323
XP_522249.3 PREDICTED: nuclear factor related to kappa-B-binding protein isoform 6 P. troglodytes 99.8 1323
NP_766354.2 Nfrkb gene product M. musculus 95.8 1295
NP_001085598.1 heat shock protein 90kDa alpha (cytosolic), class A member 1, gene 1 X. laevis 93.8 144
NP_001229964.1 nuclear factor related to kappa-B-binding protein D. rerio 70.5 1289
NP_001190553.1 heat shock protein 81-2 A. thaliana 67.4 144
XP_001695264.1 heat shock protein 90A C. reinhardtii 63.2 144
XP_961298.1 heat shock protein 90 N. crassa 58.6 133
NP_649851.1 CG11970 D. melanogaster 47.8 201
Other hits (2 of 60) [Show all]SpeciesId(%)Len(aa)
XP_001111867.2 PREDICTED: nuclear factor related to kappa-B-binding protein-like M. mulatta 99.3 1198
XP_003911021.1 PREDICTED: nuclear factor related to kappa-B-binding protein P. anubis 98.8 1277

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; ovary; embryonic tissue; mixed; brain; lung; uncharacterized tissue; liver; eye; muscle; placenta; pancreas; uterus; intestine; prostate; stomach; kidney; lymph node; mammary gland; skin; connective tissue; bone; thymus; adrenal gland; mouth; trachea; bone marrow; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q24-q25
UniSTS entry: Chr 11 RH102660
UniSTS entry: Chr 11 D11S4699
UniSTS entry: Chr 11 RH79933
UniSTS entry: Chr 11 GDB:197564
UniSTS entry: Chr 11 STS-AA025352
UniSTS entry: Chr 1 GDB:434012
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK126294.1 Homo sapiens cDNA FLJ44314 fis, clone TRACH2025932 A
NM_006165.3 Homo sapiens nuclear factor related to kappaB binding protein (NFRKB), transcript variant 2, mRNA PA
BC063280.1 Homo sapiens nuclear factor related to kappaB binding protein, mRNA (cDNA clone MGC:71524 IMAGE:5271534), complete cds PA
AL512730.1 Homo sapiens mRNA; cDNA DKFZp547B2013 (from clone DKFZp547B2013) PA
NM_001143835.1 Homo sapiens nuclear factor related to kappaB binding protein (NFRKB), transcript variant 1, mRNA PA
X80878.1 H.sapiens R kappa B mRNA P

EST sequences (10 of 210) [Show all sequences]

AI041295.1 Clone IMAGE:1642293 testis 3' read A
R23735.1 Clone IMAGE:131626 placenta 3' read
R23785.1 Clone IMAGE:131626 placenta 5' read
AI216345.1 Clone IMAGE:1844153 mixed 3' read A
CB160853.1 Clone L18POOL1n1-33-F09 liver 5' read A
CB107704.1 Clone L3SNU475-24-G05 liver 5' read
AI277848.1 Clone IMAGE:1893180 placenta 3' read A
AI277985.1 Clone IMAGE:1893343 placenta 3' read A
AI299993.1 Clone IMAGE:1909453 lung 3' read A
AI304853.1 Clone IMAGE:1908987 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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