> SERPINE1 mRNA binding protein 1 (SERBP1)
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UGID:1204679     UniGene Hs.530412     Homo sapiens (human)   SERBP1 Order cDNA clone, Links
SERPINE1 mRNA binding protein 1 (SERBP1)

Human protein-coding gene SERBP1. Represented by 1912 ESTs from 509 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 1204679 - Hs.530412]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003892080.1 PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein isoform 3 P. anubis 100.0 407
NP_001018077.1 SERBP1 gene product H. sapiens 100.0 407
XP_001164455.1 PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein isoform 4 P. troglodytes 99.8 455
XP_003127984.1 PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like isoform 3 S. scrofa 99.8 406
XP_004002111.1 PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein isoform 3 O. aries 99.8 406
XP_002715983.1 PREDICTED: SERPINE1 mRNA binding protein 1-like isoform 4 O. cuniculus 99.8 406
NP_080090.2 Serbp1 gene product M. musculus 99.5 406
XP_003434689.1 PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein isoform 2 C. lupus familiaris 99.5 406
NP_001080295.1 SERPINE1 mRNA binding protein 1 X. laevis 81.1 391
XP_002662522.2 PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like D. rerio 79.8 391
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001094963.2 PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein isoform 4 M. mulatta 99.5 395
NP_659554.1 Serbp1 gene product R. norvegicus 99.5 391

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; embryonic tissue; uncharacterized tissue; uterus; liver; skin; lung; muscle; intestine; placenta; eye; mixed; kidney; pancreas; prostate; blood; mammary gland; mouth; epididymis; lymph node; bone; ear; connective tissue; tonsil; ovary; larynx; bone marrow; adipose tissue; trachea; thymus; heart; pituitary gland; cervix; thyroid; bladder; lymph; ascites; parathyroid; stomach; vascular; spleen; umbilical cord; salivary gland; esophagus; adrenal gland; pharynx; nerve; ganglia; bronchus; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p31
UniSTS entry: Chr 1 RH65037
UniSTS entry: Chr 1 RH64710
UniSTS entry: Chr 1 D1S2367
UniSTS entry: Chr 3 D3S3275
UniSTS entry: Chr 1 RH47128 [Map Viewer]
UniSTS entry: Chr 1 HUM0C12C01 [Map Viewer]
UniSTS entry: Chr 3 RH70271
UniSTS entry: Chr 1 RH47127
UniSTS entry: Chr 1 RH65162
UniSTS entry: Chr 1 G43269
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (24)

AL080119.1 Homo sapiens mRNA; cDNA DKFZp564M2423 (from clone DKFZp564M2423) PA
AF131807.1 Homo sapiens clone 25076 mRNA sequence A
BX647139.1 Homo sapiens mRNA; cDNA DKFZp686P17171 (from clone DKFZp686P17171) PA
AK130606.1 Homo sapiens cDNA FLJ27096 fis, clone SPL04464 P
CR457383.1 Homo sapiens full open reading frame cDNA clone RZPDo834C0614D for gene PAI-RBP1, PAI-1 mRNA-binding protein; complete cds, incl. stopcodon P
NM_015640.3 Homo sapiens SERPINE1 mRNA binding protein 1 (SERBP1), transcript variant 4, mRNA P
AF151813.1 Homo sapiens CGI-55 protein mRNA, complete cds P
AK223138.1 Homo sapiens mRNA for PAI-1 mRNA-binding protein variant, clone: KDN03162 P
AK222955.1 Homo sapiens mRNA for PAI-1 mRNA-binding protein variant, clone: HRT01837 P
NM_001018069.1 Homo sapiens SERPINE1 mRNA binding protein 1 (SERBP1), transcript variant 3, mRNA P
NM_001018068.1 Homo sapiens SERPINE1 mRNA binding protein 1 (SERBP1), transcript variant 2, mRNA P
NM_001018067.1 Homo sapiens SERPINE1 mRNA binding protein 1 (SERBP1), transcript variant 1, mRNA P
BC003049.1 Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:684 IMAGE:3547236), complete cds PA
BC002488.2 Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:1357 IMAGE:3051198), complete cds PA
AY032853.1 Homo sapiens CGI-55 mRNA, partial cds PA
BC008045.2 Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:16069 IMAGE:3615828), complete cds PA
BC017449.1 Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:15923 IMAGE:3535655), complete cds PA
BC020555.1 Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:21447 IMAGE:3446543), complete cds PA
BC019273.1 Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:3552 IMAGE:2823760), complete cds PA
AK312256.1 Homo sapiens cDNA, FLJ92551, Homo sapiens PAI-1 mRNA-binding protein (PAI-RBP1), mRNA P
BC026916.1 Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:25048 IMAGE:4477452), complete cds PA
AK095960.1 Homo sapiens cDNA FLJ38641 fis, clone HHDPC2003983
BC036414.2 Homo sapiens cDNA clone IMAGE:4793926 A
AK074970.1 Homo sapiens cDNA FLJ90489 fis, clone NT2RP3003473, moderately similar to PAI-1 mRNA-binding protein P

EST sequences (10 of 1912) [Show all sequences]

AA961611.1 Clone IMAGE:1578391 mixed 3' read
AA975029.1 Clone IMAGE:1560991 mixed 3' read
T05589.1 Clone HFBDC80 brain
AA991782.1 Clone IMAGE:1623857 embryonic tissue 3' read
AI002825.1 Clone IMAGE:1684159 brain 3' read
AI022904.1 Clone IMAGE:1651070 parathyroid 3' read
AI038127.1 Clone IMAGE:1647774 parathyroid 3' read A
AI057276.1 Clone IMAGE:1669667 brain 3' read A
AI081177.1 Clone IMAGE:1597537 uncharacterized tissue 3' read PA
AI082176.1 Clone IMAGE:1662168 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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