> SHANK-associated RH domain interactor (SHARPIN)
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UGID:1204022     UniGene Hs.529755     Homo sapiens (human)   SHARPIN Order cDNA clone, Links
SHANK-associated RH domain interactor (SHARPIN)

Human protein-coding gene SHARPIN. Represented by 494 ESTs from 177 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1204022 - Hs.529755]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_112236.3 SHARPIN gene product H. sapiens 100.0 386
NP_079616.2 Sharpin gene product M. musculus 79.7 379
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_001156216.2 PREDICTED: LOW QUALITY PROTEIN: sharpin P. troglodytes 98.1 367
XP_003918795.1 PREDICTED: sharpin P. anubis 97.1 381

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; lung; prostate; uncharacterized tissue; liver; mixed; ovary; kidney; pancreas; embryonic tissue; intestine; mammary gland; thymus; eye; uterus; thyroid; adrenal gland; cervix; blood; spleen; ascites; lymph node; trachea; muscle; stomach; skin; placenta; salivary gland; lymph; heart; connective tissue; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8q24.3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AB052765.1 Homo sapiens hSIPL1B mRNA for shank-interacting protein-like 1 beta, complete cds PA
AB052764.1 Homo sapiens hSIPL1A mRNA for shank-interacting protein-like 1 alpha, complete cds PA
BC002688.2 Homo sapiens SHANK-associated RH domain interactor, mRNA (cDNA clone IMAGE:3609095), partial cds PA
AL136816.1 Homo sapiens mRNA; cDNA DKFZp434N1923 (from clone DKFZp434N1923) PA
NM_030974.3 Homo sapiens SHANK-associated RH domain interactor (SHARPIN), transcript variant 1, mRNA P
BC025244.1 Homo sapiens SHANK-associated RH domain interactor, mRNA (cDNA clone MGC:39108 IMAGE:4907493), complete cds PA
BC034028.1 Homo sapiens SHANK-associated RH domain interactor, mRNA (cDNA clone MGC:23904 IMAGE:4737834), complete cds PA
AK075518.1 Homo sapiens cDNA PSEC0216 fis, clone HEMBA1004633 P
BC017230.2 Homo sapiens SHANK-associated RH domain interactor, mRNA (cDNA clone IMAGE:4121648), partial cds PA
FJ655995.1 Homo sapiens sharpin mRNA, complete cds PA
NR_038270.1 Homo sapiens SHANK-associated RH domain interactor (SHARPIN), transcript variant 2, non-coding RNA PA

EST sequences (10 of 494) [Show all sequences]

R18262.1 Clone IMAGE:30804 brain 5' read
AA922023.1 Clone IMAGE:1543599 mixed 3' read PA
AI049948.1 Clone IMAGE:1700601 kidney 3' read PA
BX090986.1 Clone IMAGp998E18239_;_IMAGE:153209 mammary gland P
AI222704.1 Clone IMAGE:1762117 kidney 3' read A
AI264445.1 Clone IMAGE:1874681 intestine 3' read A
AA887847.1 Clone IMAGE:1161357 intestine 3' read A
AI287804.1 Clone IMAGE:1986788 uterus 3' read A
AA769979.1 Clone 1322042 testis 3' read A
AI337187.1 Clone IMAGE:2009621 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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