> Tripartite motif containing 25 (TRIM25)
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UGID:1203219     UniGene Hs.528952     Homo sapiens (human)   TRIM25 Order cDNA clone, Links
Tripartite motif containing 25 (TRIM25)

Human protein-coding gene TRIM25. Represented by 406 ESTs from 202 cDNA libraries. Corresponds to reference sequence NM_005082.4. [UniGene 1203219 - Hs.528952]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_005073.2 TRIM25 gene product H. sapiens 100.0 629
NP_033572.2 Trim25 gene product M. musculus 82.3 633
NP_956469.1 trim25 gene product D. rerio 51.4 175
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_511899.3 PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25 P. troglodytes 99.4 629
XP_003912836.1 PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25 P. anubis 96.5 629

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; lung; uncharacterized tissue; lymph node; skin; pituitary gland; mammary gland; mixed; vascular; brain; connective tissue; blood; eye; intestine; adrenal gland; uterus; pancreas; cervix; ovary; liver; embryonic tissue; thyroid; lymph; prostate; bladder; spleen; thymus; parathyroid; ascites; adipose tissue; muscle; bone marrow; stomach; testis; bone; kidney; heart; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q23.2
UniSTS entry: Chr 17 D17S1657 [Map Viewer]
UniSTS entry: Chr 17 RH12279
UniSTS entry: Chr 17 A006U31
UniSTS entry: Chr 17 D17S2138 [Map Viewer]
UniSTS entry: Chr 17 SHGC-132045
UniSTS entry: Chr 17 RH46398
UniSTS entry: Chr 17 Trim25
UniSTS entry: Chr 17 WI-9306 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BC042541.1 Homo sapiens tripartite motif-containing 25, mRNA (cDNA clone MGC:17069 IMAGE:4338818), complete cds PA
BC053605.1 Homo sapiens tripartite motif-containing 25, mRNA (cDNA clone IMAGE:6008783) A
BX538220.1 Homo sapiens mRNA; cDNA DKFZp686D24130 (from clone DKFZp686D24130) A
NM_005082.4 Homo sapiens tripartite motif containing 25 (TRIM25), mRNA P
AB208994.1 Homo sapiens mRNA for tripartite motif-containing 25 variant protein P
D21205.1 Homo sapiens efp mRNA for estrogen responsive finger protein, complete cds P
AK024597.1 Homo sapiens cDNA: FLJ20944 fis, clone ADSE01780
BC106889.2 Homo sapiens cDNA clone IMAGE:40030321
BC106890.2 Homo sapiens cDNA clone IMAGE:40030322
BC114339.2 Homo sapiens cDNA clone IMAGE:40030324
BC016924.1 Homo sapiens tripartite motif-containing 25, mRNA (cDNA clone MGC:21231 IMAGE:4419084), complete cds PA
AK310720.1 Homo sapiens cDNA, FLJ17762 P
BC013752.1 Homo sapiens tripartite motif-containing 25, mRNA (cDNA clone IMAGE:4525015), with apparent retained intron A
BC038247.2 Homo sapiens tripartite motif-containing 25, mRNA (cDNA clone IMAGE:4524805) A

EST sequences (10 of 406) [Show all sequences]

AA987226.1 Clone IMAGE:1604232 lung 3' read A
AA987574.1 Clone IMAGE:1602495 lung 3' read A
AA908990.1 Clone IMAGE:1523062 mixed 3' read A
R17735.1 Clone IMAGE:30998 brain 5' read
AI023738.1 Clone IMAGE:1654985 mixed 3' read
AA927846.1 Clone IMAGE:1562923 mixed 3' read A
AI081904.1 Clone IMAGE:1662348 mixed 3' read
AI126928.1 Clone IMAGE:1707889 heart 3' read A
AI151491.1 Clone IMAGE:1715389 placenta 3' read
BX094379.1 Clone IMAGp998A142000_;_IMAGE:810133 ovary


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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