> Small nuclear ribonucleoprotein polypeptide A' (SNRPA1)
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UGID:1203030     UniGene Hs.528763     Homo sapiens (human)   SNRPA1 Order cDNA clone, Links
Small nuclear ribonucleoprotein polypeptide A' (SNRPA1)

Human protein-coding gene SNRPA1. Represented by 369 ESTs from 190 cDNA libraries. Corresponds to reference sequence NM_003090.2. [UniGene 1203030 - Hs.528763]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001085262.1 PREDICTED: u2 small nuclear ribonucleoprotein A' M. mulatta 100.0 254
XP_003901495.1 PREDICTED: U2 small nuclear ribonucleoprotein A' P. anubis 100.0 254
XP_510625.2 PREDICTED: U2 small nuclear ribonucleoprotein A' P. troglodytes 100.0 254
NP_003081.2 SNRPA1 gene product H. sapiens 100.0 254
XP_848923.1 PREDICTED: U2 small nuclear ribonucleoprotein A' isoform 2 C. lupus familiaris 100.0 254
XP_001490145.1 PREDICTED: u2 small nuclear ribonucleoprotein A'-like E. caballus 100.0 254
XP_001925384.4 PREDICTED: U2 small nuclear ribonucleoprotein A' S. scrofa 100.0 254
NP_001092418.1 SNRPA1 gene product B. taurus 100.0 254
NP_001119827.1 SNPRA1 gene product O. aries 100.0 254
NP_067311.4 Snrpa1 gene product M. musculus 99.6 254
XP_002728810.1 PREDICTED: U2 small nuclear ribonucleoprotein A'-like R. norvegicus 99.6 254
NP_001087863.1 small nuclear ribonucleoprotein polypeptide A' X. laevis 88.6 254
NP_001007384.2 U2 small nuclear ribonucleoprotein A' D. rerio 88.1 252
NP_172447.1 U2 small nuclear ribonucleoprotein A' A. thaliana 61.9 248
NP_610315.1 U2A D. melanogaster 60.4 264
XP_001695876.1 hypothetical protein CHLREDRAFT_137847 C. reinhardtii 57.7 233
NP_494763.1 Protein MOG-2 C. elegans 54.4 252
XP_962364.1 U2 small nuclear ribonucleoprotein A' N. crassa 47.0 198
Other hits (2 of 44) [Show all]SpeciesId(%)Len(aa)
XP_002718340.1 PREDICTED: small nuclear ribonucleoprotein polypeptide A' O. cuniculus 98.4 254
XP_001365393.1 PREDICTED: u2 small nuclear ribonucleoprotein A'-like M. domestica 98.0 254

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uterus; uncharacterized tissue; cervix; spleen; prostate; bladder; liver; pituitary gland; blood; thymus; lung; larynx; placenta; lymph node; bone marrow; embryonic tissue; pancreas; kidney; lymph; bone; connective tissue; eye; trachea; mixed; intestine; mammary gland; muscle; stomach; ovary; esophagus; heart; thyroid; ascites; skin; pharynx; umbilical cord; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q26.3
UniSTS entry: Chr 15 D15S910
UniSTS entry: Chr 2 Snrpa1
UniSTS entry: Chr 15 RH118954
UniSTS entry: Chr 15 SHGC-79848
UniSTS entry: Chr 15 STS-AA011337 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AJ130971.1 Homo sapiens mRNA for U2 snRNP-specific A' protein, alternative transcript 4 P
AJ130972.1 Homo sapiens mRNA for U2 snRNP-specific A' protein, alternative transcript 3 P
NM_003090.2 Homo sapiens small nuclear ribonucleoprotein polypeptide A' (SNRPA1), mRNA PA
BC067846.1 Homo sapiens small nuclear ribonucleoprotein polypeptide A', mRNA (cDNA clone MGC:87438 IMAGE:30330402), complete cds PA
BC071717.1 Homo sapiens small nuclear ribonucleoprotein polypeptide A', mRNA (cDNA clone MGC:88013 IMAGE:4514975), complete cds PA
AK223110.1 Homo sapiens mRNA for small nuclear ribonucleoprotein polypeptide A' variant, clone: KAT09545 PA
AK223070.1 Homo sapiens mRNA for small nuclear ribonucleoprotein polypeptide A' variant, clone: KAT01812 PA
AK290078.1 Homo sapiens cDNA FLJ75425 complete cds, highly similar to Homo sapiens small nuclear ribonucleoprotein polypeptide A', mRNA P
AK312200.1 Homo sapiens cDNA, FLJ92488, highly similar to Homo sapiens small nuclear ribonucleoprotein polypeptide A'(SNRPA1), mRNA P
BC022816.1 Homo sapiens small nuclear ribonucleoprotein polypeptide A', mRNA (cDNA clone MGC:39248 IMAGE:4904205), complete cds PA
AK090986.1 Homo sapiens cDNA FLJ33667 fis, clone BRAMY2027782, moderately similar to U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A' P
X13482.1 Human mRNA for U2 snRNP-specific A' protein PA

EST sequences (10 of 369) [Show all sequences]

AA974400.1 Clone IMAGE:1586839 uncharacterized tissue 3' read PA
AA987479.1 Clone IMAGE:1601639 lung 3' read A
AA994169.1 Clone IMAGE:1621235 testis 3' read A
AA838392.1 Clone IMAGE:1422546 kidney P
AA905409.1 Clone IMAGE:1505057 mixed 3' read A
AI002460.1 Clone IMAGE:1592984 kidney 3' read A
AI018111.1 Clone IMAGE:1624156 embryonic tissue 3' read A
AI024630.1 Clone IMAGE:1640977 testis 3' read P
BX102197.1 Clone IMAGp998E16692_;_IMAGE:307959 lung
AI184363.1 Clone IMAGE:1714363 placenta 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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