Potassium channel tetramerisation domain containing 21 (KCTD21)

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UGID:1202706 UniGene Hs.528439 Homo sapiens (human) KCTD21

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Potassium channel tetramerisation domain containing 21 (KCTD21)

Human protein-coding gene KCTD21. Represented by 155 ESTs from 77 cDNA libraries. Corresponds to reference sequence NM_001029859.1. [UniGene 1202706 - Hs.528439]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_508664.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: BTB/POZ domain-containing protein KCTD21	P. troglodytes	100.0	328
NP_001034128.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Kctd21 gene product	M. musculus	100.0	259
NP_001025030.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	KCTD21 gene product	H. sapiens	100.0	259
XP_851103.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: BTB/POZ domain-containing protein KCTD21	C. lupus familiaris	100.0	259
XP_003365419.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: BTB/POZ domain-containing protein KCTD21-like	E. caballus	100.0	259
NP_001192622.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	BTB/POZ domain-containing protein KCTD21	B. taurus	100.0	259
NP_001102621.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	BTB/POZ domain-containing protein KCTD21	R. norvegicus	99.6	259
XP_003910519.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: BTB/POZ domain-containing protein KCTD21	P. anubis	99.6	259
XP_004019477.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: BTB/POZ domain-containing protein KCTD21	O. aries	99.6	259
Other hits (2 of 10) [Show all]		Species	Id(%)	Len(aa)
XP_002708716.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: potassium channel tetramerisation domain containing 12-like	O. cuniculus	99.2	259
XP_001093337.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: BTB/POZ domain-containing protein KCTD21 isoform 2	M. mulatta	98.8	330

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; epididymis; uterus; kidney; bladder; cervix; connective tissue; larynx; stomach; testis; prostate; mixed; placenta; blood; lung; mouth; thyroid; uncharacterized tissue; ovary; trachea; thymus; eye; skin; mammary gland; intestine; spleen; pharynx; ascites; pancreas; bone; umbilical cord; esophagus

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	11
Map position:	11q14.1
UniSTS entry:	Chr 1	RH17478
UniSTS entry:	Chr 11	SGC33037	[Map Viewer]

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_001029859.1	Homo sapiens potassium channel tetramerisation domain containing 21 (KCTD21), mRNA	PA
AK095233.1	Homo sapiens cDNA FLJ37914 fis, clone CTONG1000086	P
AK300320.1	Homo sapiens cDNA FLJ54885 complete cds, weakly similar to Mus musculus potassium channel tetramerisation domain containing 11 (Kctd11), mRNA	P
BC036058.1	Homo sapiens potassium channel tetramerisation domain containing 21, mRNA (cDNA clone MGC:33448 IMAGE:5277643), complete cds	PA

EST sequences (10 of 155) [Show all sequences]

BX100067.1	Clone IMAGp998O115479_;_IMAGE:2215906	ovary		A
BX114694.1	Clone IMAGp998C15578_;_IMAGE:264134	skin		A
AI391633.1	Clone IMAGE:2107380	uncharacterized tissue	3' read
R54118.1	Clone IMAGE:41494	brain	5' read
AI567269.1	Clone IMAGE:2215906	ovary	3' read	A
AI601267.1	Clone IMAGE:2152400	intestine	3' read
AI620540.1	Clone IMAGE:2258772	stomach	3' read
BX377479.2	Clone CS0DI007YM17	placenta	3' read
BX377480.2	Clone CS0DI007YM17	placenta	5' read	P
AW996313.1		mammary gland		P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria