> Heterogeneous nuclear ribonucleoprotein D-like (HNRPDL)
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UGID:1087306     UniGene Hs.527105     Homo sapiens (human)   HNRPDL Order cDNA clone, Links
Heterogeneous nuclear ribonucleoprotein D-like (HNRPDL)

Human protein-coding gene HNRPDL. Represented by 2139 ESTs from 476 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 1087306 - Hs.527105]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001142372.1 PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 4 P. troglodytes 100.0 419
NP_112740.1 HNRPDL gene product H. sapiens 100.0 419
XP_003364726.1 PREDICTED: heterogeneous nuclear ribonucleoprotein D-like E. caballus 100.0 270
XP_004009994.1 PREDICTED: heterogeneous nuclear ribonucleoprotein D-like O. aries 100.0 270
XP_003129409.3 PREDICTED: heterogeneous nuclear ribonucleoprotein D-like, partial S. scrofa 100.0 215
XP_001088510.1 PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 6 M. mulatta 99.8 419
XP_003898743.1 PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1 P. anubis 99.8 419
XP_858404.1 PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 12 C. lupus familiaris 99.8 419
NP_001077194.1 HNRPDL gene product B. taurus 99.8 419
NP_057899.2 Hnrpdl gene product M. musculus 99.3 419
NP_001079609.1 heterogeneous nuclear ribonucleoprotein D-like-A X. laevis 91.5 292
NP_998557.1 hnrpdl gene product D. rerio 87.4 292
XP_961230.1 hypothetical protein NCU04239 N. crassa 49.1 177
NP_497799.1 Protein MSI-1 C. elegans 48.9 219
NP_652209.1 squid, isoform C D. melanogaster 48.3 176
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
NP_001026313.1 HNRPDL gene product G. gallus 98.3 300
XP_001362287.1 PREDICTED: heterogeneous nuclear ribonucleoprotein D M. domestica 98.3 416

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uterus; embryonic tissue; uncharacterized tissue; lung; testis; liver; thymus; kidney; spleen; intestine; placenta; eye; prostate; mixed; blood; pancreas; skin; muscle; bone; stomach; mammary gland; heart; mouth; trachea; connective tissue; ovary; adrenal gland; thyroid; pharynx; bone marrow; lymph node; bladder; pituitary gland; larynx; ear; esophagus; vascular; cervix; nerve; parathyroid; amniotic fluid; ascites; lymph; ganglia; epididymis; adipose tissue; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q21.22
UniSTS entry: Chr 4 SHGC-67337 [Map Viewer]
UniSTS entry: Chr 4 SHGC-24715 [Map Viewer]
UniSTS entry: Chr 4 G20700
UniSTS entry: Chr 4 A006C21 [Map Viewer]
UniSTS entry: Chr 2 RH125689
UniSTS entry: Chr 4 SHGC-50505
UniSTS entry: Chr 4 RH92417
UniSTS entry: SHGC-132798
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

AB017019.1 Homo sapiens mRNA for JKTBP2, complete cds P
AY453824.1 Homo sapiens CArG binding factor mRNA, complete cds PA
CR407623.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0111D for gene HNRPDL, heterogeneous nuclear ribonucleoprotein D-like complete cds, without stopcodon P
BC071944.1 Homo sapiens heterogeneous nuclear ribonucleoprotein D-like, mRNA (cDNA clone MGC:88631 IMAGE:5015862), complete cds PA
NM_031372.3 Homo sapiens heterogeneous nuclear ribonucleoprotein D-like (HNRPDL), transcript variant 2, mRNA PA
BC007392.2 Homo sapiens heterogeneous nuclear ribonucleoprotein D-like, mRNA (cDNA clone IMAGE:3832877), partial cds PA
AB066484.1 Homo sapiens hnrpdl mRNA for JKTBP1delta6, complete cds P
BC011714.2 Homo sapiens heterogeneous nuclear ribonucleoprotein D-like, mRNA (cDNA clone MGC:19802 IMAGE:3929324), complete cds PA
AK057480.1 Homo sapiens cDNA FLJ32918 fis, clone TESTI2006588 PA
AK294683.1 Homo sapiens cDNA FLJ59198 complete cds, highly similar to Homo sapiens heterogeneous nuclear ribonucleoprotein D-like (HNRPDL), transcript variant 2, mRNA P
AK300122.1 Homo sapiens cDNA FLJ60148 complete cds, highly similar to Homo sapiens heterogeneous nuclear ribonucleoprotein D-like (HNRPDL), transcript variant 2, mRNA P
BC018961.2 Homo sapiens heterogeneous nuclear ribonucleoprotein D-like, mRNA (cDNA clone IMAGE:3956124) PA
X52767.1 H.sapiens unusual BuChE mRNA P
NM_001207000.1 Homo sapiens heterogeneous nuclear ribonucleoprotein D-like (HNRPDL), transcript variant 4, mRNA PA
NR_003249.2 Homo sapiens heterogeneous nuclear ribonucleoprotein D-like (HNRPDL), transcript variant 3, non-coding RNA PA
D89678.1 Homo sapiens mRNA for A+U-rich element RNA binding factor, complete cds P
D89092.1 Homo sapiens hnRNP JKTBP mRNA, complete cds P

EST sequences (10 of 2139) [Show all sequences]

AA974874.1 Clone IMAGE:1588729 kidney 3' read A
R14627.1 Clone IMAGE:35710 brain 5' read P
AA976279.1 Clone IMAGE:1591400 kidney 3' read A
AA977427.1 Clone IMAGE:1590631 kidney 3' read PA
AA978121.1 Clone IMAGE:1578543 mixed 3' read A
AA991455.1 Clone IMAGE:1609018 mammary gland 3' read A
AA992767.1 Clone IMAGE:1618537 testis 3' read A
AA995050.1 Clone IMAGE:1631558 mammary gland 3' read A
AA902220.1 Clone IMAGE:1519221 uncharacterized tissue 3' read PA
AI003516.1 Clone IMAGE:1699117 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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