> Potassium channel tetramerisation domain containing 1 (KCTD1)
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UGID:1086831     UniGene Hs.526630     Homo sapiens (human)   KCTD1 Links
Potassium channel tetramerisation domain containing 1 (KCTD1)

Human protein-coding gene KCTD1. Represented by 163 ESTs from 91 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 1086831 - Hs.526630]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001136202.1 KCTD1 gene product H. sapiens 100.0 864
XP_003315882.1 PREDICTED: uncharacterized protein LOC455348 P. troglodytes 100.0 256
XP_003434972.1 PREDICTED: uncharacterized protein LOC480170 C. lupus familiaris 100.0 256
XP_003365570.1 PREDICTED: BTB/POZ domain-containing protein KCTD1-like E. caballus 100.0 256
NP_001231900.1 potassium channel tetramerisation domain containing 1 S. scrofa 99.6 256
NP_001073829.1 KCTD1 gene product B. taurus 99.6 256
NP_001136203.1 Kctd1 gene product M. musculus 99.2 860
NP_001006012.1 kctd15a gene product D. rerio 83.3 256
NP_001086987.1 BTB/POZ domain-containing protein kctd15 X. laevis 82.8 254
NP_611588.1 CG10440, isoform A D. melanogaster 56.5 246
Other hits (2 of 29) [Show all]SpeciesId(%)Len(aa)
XP_004020509.1 PREDICTED: BTB/POZ domain-containing protein KCTD1 O. aries 99.2 256
XP_001062225.2 PREDICTED: uncharacterized protein LOC291772 R. norvegicus 99.1 860

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; lung; mixed; uterus; pancreas; connective tissue; skin; larynx; ovary; intestine; mammary gland; eye; embryonic tissue; uncharacterized tissue; kidney; bone; stomach; cervix; testis; lymph node; heart; thymus; blood; liver; ganglia; thyroid; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18q11.2
UniSTS entry: Chr 18 G43629
UniSTS entry: Chr 18 RH18471
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC042371.1 Homo sapiens cDNA clone IMAGE:4816353 A
AF542549.1 Homo sapiens potassium channel tetramerization domain-containing 1 (KCTD1) mRNA, complete cds P
BC063652.1 Homo sapiens potassium channel tetramerisation domain containing 1, mRNA (cDNA clone IMAGE:4802987), complete cds PA
NM_198991.3 Homo sapiens potassium channel tetramerisation domain containing 1 (KCTD1), transcript variant 2, mRNA PA
AK289870.1 Homo sapiens cDNA FLJ75998 complete cds, highly similar to Homo sapiens potassium channel tetramerisation domain containing 1 (KCTD1), mRNA P
NM_001136205.2 Homo sapiens potassium channel tetramerisation domain containing 1 (KCTD1), transcript variant 1, mRNA PA
NM_001142730.2 Homo sapiens potassium channel tetramerisation domain containing 1 (KCTD1), transcript variant 3, mRNA PA
NM_001258222.1 Homo sapiens potassium channel tetramerisation domain containing 1 (KCTD1), transcript variant 5, mRNA PA
NM_001258221.1 Homo sapiens potassium channel tetramerisation domain containing 1 (KCTD1), transcript variant 4, mRNA PA

EST sequences (10 of 163) [Show all sequences]

AA948043.1 Clone IMAGE:1416039 lung 3' read
AA905325.1 Clone IMAGE:1506517 mixed 3' read P
AA907417.1 Clone IMAGE:1521761 lung 3' read
AA948466.1 Clone IMAGE:1561752 mixed 3' read P
AI127359.1 Clone IMAGE:1708613 heart 3' read
AI167938.1 Clone IMAGE:1565643 mixed 3' read P
AI191066.1 Clone IMAGE:1740003 lung 3' read P
AI241933.1 Clone IMAGE:1977179 brain 3' read P
CB160416.1 Clone L18POOL1n1-17-E05 liver 5' read P
AA904207.1 Clone IMAGE:1440441 ganglia 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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