> Coiled-coil domain containing 88C (CCDC88C)
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UGID:916283     UniGene Hs.525536     Homo sapiens (human)   CCDC88C Links
Coiled-coil domain containing 88C (CCDC88C)

Human protein-coding gene CCDC88C. Represented by 165 ESTs from 82 cDNA libraries. Corresponds to reference sequence NM_001080414.3. [UniGene 916283 - Hs.525536]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001073883.2 CCDC88C gene product H. sapiens 100.0 2027
XP_510123.2 PREDICTED: protein Daple isoform 2 P. troglodytes 99.6 2027
NP_080957.2 Ccdc88c gene product M. musculus 86.3 2008
XP_001921927.1 PREDICTED: protein Daple D. rerio 59.8 1996
NP_995984.1 girdin, isoform B D. melanogaster 48.2 168
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
XP_003902215.1 PREDICTED: protein Daple P. anubis 98.3 2032
XP_001089462.2 PREDICTED: protein Daple-like M. mulatta 97.9 2032

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; mixed; brain; connective tissue; trachea; thymus; blood; spleen; lymph node; kidney; thyroid; ascites; lymph; prostate; lung; mouth; mammary gland; embryonic tissue; pancreas; cervix; testis; placenta; stomach; uterus; eye; intestine; bone; heart; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q32.11
UniSTS entry: Chr 3 RH68239
UniSTS entry: Chr 12 D14S655E
UniSTS entry: Chr 14 WI-21906 [Map Viewer]
UniSTS entry: Chr 12 A001X15 [Map Viewer]
UniSTS entry: Chr 14 SHGC-32353 [Map Viewer]
UniSTS entry: Chr 12 G19743
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AF070587.1 Homo sapiens clone 24741 mRNA sequence PA
BX248302.1 human full-length cDNA clone CS0DL007YB06 of B cells (Ramos cell line) of Homo sapiens (human) P
AL137353.1 Homo sapiens mRNA; cDNA DKFZp434G0825 (from clone DKFZp434G0825) A
AK022593.1 Homo sapiens cDNA FLJ12531 fis, clone NT2RM4000199 P
BC127900.1 Homo sapiens cDNA clone IMAGE:40132590, partial cds
NM_001080414.3 Homo sapiens coiled-coil domain containing 88C (CCDC88C), mRNA PA
BC028565.2 Homo sapiens coiled-coil domain containing 88C, mRNA (cDNA clone IMAGE:3634458), partial cds PA
AL833046.1 Homo sapiens mRNA; cDNA DKFZp666F109 (from clone DKFZp666F109) PA
AK302839.1 Homo sapiens cDNA FLJ59076 complete cds, highly similar to Mus musculus coiled-coil domain containing 88C (Ccdc88c), mRNA P
BC032316.1 Homo sapiens coiled-coil domain containing 88C, mRNA (cDNA clone IMAGE:5219499), complete cds A
BC035914.1 Homo sapiens coiled-coil domain containing 88C, mRNA (cDNA clone IMAGE:5496219), complete cds PA

EST sequences (10 of 165) [Show all sequences]

BX103204.1 Clone IMAGp998A105713 uncharacterized tissue 5' read P
AI380740.1 Clone IMAGE:2107229 uncharacterized tissue 3' read PA
R48492.1 Clone IMAGE:153859 mammary gland 3' read
AI431958.1 Clone IMAGE:2120015 pancreas 3' read A
AI652572.1 Clone IMAGE:2310198 uncharacterized tissue 3' read PA
AI670941.1 Clone IMAGE:2305425 uncharacterized tissue 3' read PA
AI678881.1 Clone IMAGE:2256399 stomach 3' read
AI686509.1 Clone IMAGE:2252953 prostate 3' read P
AI810486.1 Clone IMAGE:2312832 prostate 3' read PA
BX279814.1 Clone IMAGp998A138438_;_IMAGE:3453972 placenta


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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