> ADP-ribosylation factor 6 (ARF6)
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UGID:916077     UniGene Hs.525330     Homo sapiens (human)   ARF6 Order cDNA clone, Links
ADP-ribosylation factor 6 (ARF6)

Human protein-coding gene ARF6. Represented by 588 ESTs from 269 cDNA libraries. Corresponds to reference sequence NM_001663.3. [UniGene 916077 - Hs.525330]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_031507.1 Arf6 gene product M. musculus 100.0 174
NP_077066.1 Arf6 gene product R. norvegicus 100.0 174
XP_001370639.1 PREDICTED: ADP-ribosylation factor 6-like M. domestica 100.0 174
XP_003228403.1 PREDICTED: ADP-ribosylation factor 6-like A. carolinensis 100.0 174
XP_002200661.1 PREDICTED: ADP-ribosylation factor 6 T. guttata 100.0 174
NP_001006797.1 arf6.2 gene product X. tropicalis 100.0 174
NP_001075174.1 ADP-ribosylation factor 6 G. gallus 100.0 174
XP_001514159.1 PREDICTED: ADP-ribosylation factor 6-like O. anatinus 100.0 174
XP_001096620.2 PREDICTED: ADP-ribosylation factor 6-like M. mulatta 100.0 174
XP_003901818.1 PREDICTED: ADP-ribosylation factor 6 P. anubis 100.0 174
XP_509935.2 PREDICTED: ADP-ribosylation factor 6 isoform 2 P. troglodytes 100.0 174
NP_001654.1 ARF6 gene product H. sapiens 100.0 174
XP_547801.1 PREDICTED: ADP-ribosylation factor 6 C. lupus familiaris 100.0 174
XP_001916100.1 PREDICTED: ADP-ribosylation factor 6-like E. caballus 100.0 174
NP_001072145.1 ARF6 gene product S. scrofa 100.0 174
XP_003582756.1 PREDICTED: ADP-ribosylation factor 6 B. taurus 100.0 174
NP_001156020.1 ARF6 gene product O. aries 100.0 174
XP_003206890.1 PREDICTED: ADP-ribosylation factor 6-like, partial M. gallopavo 100.0 148
NP_001154847.1 arf6b gene product D. rerio 99.4 174
NP_001086677.1 ADP-ribosylation factor 6 X. laevis 99.4 174
NP_523751.2 ADP ribosylation factor 51F, isoform A D. melanogaster 98.9 174
NP_503011.1 Protein ARF-6 C. elegans 92.5 174
XP_001690893.1 small ARF-related GTPase C. reinhardtii 78.3 175
NP_182239.1 ADP-ribosylation factor 1 A. thaliana 75.6 176
XP_965243.1 ADP-ribosylation factor 1 N. crassa 75.3 177
NP_010144.1 Arf2p S. cerevisiae 70.9 174
Other hits (2 of 51) [Show all]SpeciesId(%)Len(aa)
XP_003399058.1 PREDICTED: ADP-ribosylation factor 6-like B. terrestris 99.4 174
XP_003962513.1 PREDICTED: ADP-ribosylation factor 6-like T. rubripes 99.4 174

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; intestine; uterus; skin; uncharacterized tissue; brain; mammary gland; mouth; lymph node; placenta; embryonic tissue; larynx; mixed; kidney; nerve; bladder; prostate; lung; cervix; eye; spleen; connective tissue; liver; blood; vascular; adrenal gland; heart; trachea; thymus; tonsil; salivary gland; ascites; stomach; ear; pancreas; ovary; bone; muscle; thyroid; pharynx; lymph; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q21.3
UniSTS entry: Chr 3 RH80260
UniSTS entry: Chr 14 SHGC-64342
UniSTS entry: Chr 14 SHGC-2638 [Map Viewer]
UniSTS entry: Chr 14 SHGC-64115
UniSTS entry: Chr 14 D14S793
UniSTS entry: Chr 14 ARF6_719
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AL117621.1 Homo sapiens mRNA; cDNA DKFZp564M0264 (from clone DKFZp564M0264) A
NM_001663.3 Homo sapiens ADP-ribosylation factor 6 (ARF6), mRNA P
CR541964.1 Homo sapiens full open reading frame cDNA clone RZPDo834F0734D for gene ARF6, ADP-ribosylation factor 6; complete cds, without stopcodon P
CR541939.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0734D for gene ARF6, ADP-ribosylation factor 6; complete cds, incl. stopcodon P
BT019868.1 Homo sapiens ADP-ribosylation factor 6 mRNA, complete cds P
BC002952.1 Homo sapiens ADP-ribosylation factor 6, mRNA (cDNA clone IMAGE:3544168) PA
BC008918.2 Homo sapiens ADP-ribosylation factor 6, mRNA (cDNA clone MGC:16117 IMAGE:3626100), complete cds PA
AK313790.1 Homo sapiens cDNA, FLJ94403, Homo sapiens ADP-ribosylation factor 6 (ARF6), mRNA P
AF493885.1 Homo sapiens ADP-ribosylation factor protein 6 (ARF6) mRNA, complete cds P
BC030291.1 Homo sapiens cDNA clone IMAGE:5402602 A
AF047432.1 Homo sapiens ADP-ribosylation factor mRNA, complete cds P
M57763.1 Human ADP-ribosylation factor (hARF6) mRNA, complete cds P

EST sequences (10 of 588) [Show all sequences]

AI039080.1 Clone IMAGE:1657493 embryonic tissue 3' read A
AI074075.1 Clone IMAGE:1594252 intestine 3' read P
AI088371.1 Clone IMAGE:1695916 uterus 3' read A
AI249376.1 Clone IMAGE:2005112 pancreas 3' read A
CB161722.1 Clone L17N670205n1-51-B07 liver 5' read
CB163386.1 Clone L18POOL1n1-51-C05 liver 5' read
CB117521.1 Clone L4SNU368-27-F10 liver 5' read
CB111758.1 Clone L5HLK1-21-D05 liver 5' read
CB130392.1 Clone L12JSHC0-7-D12 liver 5' read
CB134151.1 Clone L14ChoiCK0-16-C02 liver 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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