> CAP-GLY domain containing linker protein 1 (CLIP1)
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UGID:915556     UniGene Hs.524809     Homo sapiens (human)   CLIP1 Order cDNA clone, Links
CAP-GLY domain containing linker protein 1 (CLIP1)

Human protein-coding gene CLIP1. Represented by 377 ESTs from 217 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 915556 - Hs.524809]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001234926.1 CLIP1 gene product H. sapiens 100.0 1437
XP_001167353.2 PREDICTED: CAP-Gly domain-containing linker protein 1 isoform 11 P. troglodytes 99.7 1432
XP_001098085.2 PREDICTED: CAP-Gly domain-containing linker protein 1-like isoform 3 M. mulatta 99.5 1437
XP_003907359.1 PREDICTED: CAP-Gly domain-containing linker protein 1 P. anubis 99.5 1437
NP_062739.2 Clip1 gene product M. musculus 93.6 1390
XP_001920292.3 PREDICTED: CAP-Gly domain-containing linker protein 1-like D. rerio 62.8 905
Other hits (2 of 26) [Show all]SpeciesId(%)Len(aa)
XP_004017386.1 PREDICTED: CAP-Gly domain-containing linker protein 1 isoform 2 O. aries 95.8 1437
NP_001179752.1 CAP-Gly domain-containing linker protein 1 B. taurus 95.4 1426

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; lung; uterus; testis; mouth; liver; vascular; thyroid; skin; pancreas; kidney; uncharacterized tissue; muscle; embryonic tissue; eye; intestine; mixed; stomach; mammary gland; pharynx; bone marrow; bladder; larynx; prostate; connective tissue; pituitary gland; nerve; trachea; spleen; lymph node; blood; heart; adrenal gland; esophagus; spinal cord; ascites; lymph; thymus; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q24.3
UniSTS entry: Chr 12 STS-X64838 [Map Viewer]
UniSTS entry: Chr 12 D12S1158E
UniSTS entry: Chr 12 WI-14983 [Map Viewer]
UniSTS entry: Chr 12 D12S1321 [Map Viewer]
UniSTS entry: Chr 12 D12S1902
UniSTS entry: Chr 12 D12S1167E
UniSTS entry: Chr 1 D11S2921
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

BC047895.1 Homo sapiens CAP-GLY domain containing linker protein 1, mRNA (cDNA clone IMAGE:5742243), partial cds PA
AK126990.1 Homo sapiens cDNA FLJ45045 fis, clone BRAWH3021580, highly similar to Restin (Cytoplasmic linker protein 170 alpha-2) P
NM_002956.2 Homo sapiens CAP-GLY domain containing linker protein 1 (CLIP1), transcript variant 1, mRNA PA
NM_198240.1 Homo sapiens CAP-GLY domain containing linker protein 1 (CLIP1), transcript variant 2, mRNA PA
BC062543.1 Homo sapiens CAP-GLY domain containing linker protein 1, mRNA (cDNA clone IMAGE:5921093), partial cds PA
AY563000.1 Homo sapiens restin isoform b (RSN) mRNA, partial cds, alternatively spliced P
AB209115.1 Homo sapiens mRNA for restin isoform a variant protein P
BC114213.1 Homo sapiens CAP-GLY domain containing linker protein 1, mRNA (cDNA clone MGC:131604 IMAGE:7961952), complete cds P
BC117209.1 Homo sapiens CAP-GLY domain containing linker protein 1, mRNA (cDNA clone MGC:150818 IMAGE:40125760), complete cds P
BC126305.1 Homo sapiens CAP-GLY domain containing linker protein 1, mRNA (cDNA clone MGC:161583 IMAGE:8992021), complete cds P
AF045653.1 Homo sapiens cytoplasmic linker protein CLIP-170 mRNA, CLIP(11+35) isoform, partial cds P
AF045652.1 Homo sapiens cytoplasmic linker protein CLIP-170 mRNA, CLIP-170(11) isoform, partial cds
X64838.1 H.sapiens mRNA for restin P
NM_001247997.1 Homo sapiens CAP-GLY domain containing linker protein 1 (CLIP1), transcript variant 3, mRNA PA
M97501.1 Human cytoplasmic linker protein-170 alpha-2 (CLIP-170) mRNA, complete cds P

EST sequences (10 of 377) [Show all sequences]

AA962506.1 Clone IMAGE:1602170 lung 3' read
AI088525.1 Clone IMAGE:1696583 uterus 3' read
AI094608.1 Clone IMAGE:1670625 brain 3' read
AI148838.1 Clone IMAGE:1714526 placenta 3' read A
AI219865.1 Clone IMAGE:1842292 mixed 3' read P
R28129.1 Clone IMAGE:133953 placenta 5' read
CB117305.1 Clone L4SNU368-30-A05 liver 5' read
CB136215.1 Clone L14ChoiCK0-14-F04 liver 5' read P
R32139.1 Clone IMAGE:135328 placenta 5' read
AI351391.1 Clone IMAGE:1934654 embryonic tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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