> Tubulin, alpha 1b (TUBA1B)
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UGID:915137     UniGene Hs.524390     Homo sapiens (human)   TUBA1B Order cDNA clone, Links
Tubulin, alpha 1b (TUBA1B)

Human protein-coding gene TUBA1B. Represented by 15923 ESTs from 676 cDNA libraries. EST representation biased toward infant. Corresponds to reference sequence NM_006082.2. [UniGene 915137 - Hs.524390]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_035784.1 Tuba1b gene product M. musculus 100.0 450
NP_001037735.1 tubulin alpha-1B chain R. norvegicus 100.0 450
XP_001363356.1 PREDICTED: tubulin alpha-1B chain-like M. domestica 100.0 450
XP_003223239.1 PREDICTED: tubulin alpha-1A chain-like isoform 2 A. carolinensis 100.0 450
NP_001098596.2 tuba1l gene product D. rerio 100.0 450
XP_004076821.1 PREDICTED: tubulin alpha chain-like O. latipes 100.0 450
NP_001107705.1 tuba4a gene product X. tropicalis 100.0 450
XP_003207683.1 PREDICTED: tubulin alpha-1B chain-like M. gallopavo 100.0 450
XP_001108691.1 PREDICTED: tubulin alpha-1B chain-like isoform 29 M. mulatta 100.0 450
XP_003906368.1 PREDICTED: tubulin alpha-1B chain isoform 1 P. anubis 100.0 450
NP_001092014.1 TUBA1A gene product P. troglodytes 100.0 450
NP_006073.2 TUBA1B gene product H. sapiens 100.0 450
XP_862471.2 PREDICTED: tubulin alpha-1A chain isoform 10 C. lupus familiaris 100.0 450
XP_001504224.1 PREDICTED: tubulin alpha-1A chain E. caballus 100.0 450
NP_001038009.1 TUBA1B gene product S. scrofa 100.0 450
NP_001108328.1 TUBA1B gene product B. taurus 100.0 450
NP_001182735.1 alpha tubulin O. cuniculus 100.0 450
XP_003977866.1 PREDICTED: tubulin alpha chain-like T. rubripes 99.8 457
XP_004004997.1 PREDICTED: tubulin alpha-1D chain-like O. aries 99.8 451
XP_001510837.2 PREDICTED: tubulin alpha-1A chain-like O. anatinus 99.6 474
XP_003439120.1 PREDICTED: tubulin alpha-1A chain-like O. niloticus 99.6 452
NP_001080056.1 tubulin, alpha 1a X. laevis 99.6 451
XP_002195767.1 PREDICTED: tubulin, alpha 8 isoform 1 T. guttata 99.5 447
NP_476772.1 alpha-Tubulin at 84B D. melanogaster 98.4 449
NP_497663.1 Protein MEC-12 C. elegans 96.2 449
NP_171974.1 tubulin alpha-2/alpha-4 chain A. thaliana 90.7 449
XP_001691876.1 alpha tubulin 1 C. reinhardtii 90.2 450
XP_963223.1 tubulin alpha-B chain N. crassa 84.4 448
NP_013625.1 Tub1p S. cerevisiae 78.9 446
Other hits (2 of 50) [Show all]SpeciesId(%)Len(aa)
XP_002738831.1 PREDICTED: GL12416-like S. kowalevskii 99.3 450
XP_001630154.1 predicted protein N. vectensis 99.3 450

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: infant [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; lung; testis; embryonic tissue; liver; eye; intestine; placenta; uterus; skin; muscle; kidney; lymph; pancreas; cervix; ovary; ascites; blood; mixed; connective tissue; prostate; stomach; thymus; heart; mammary gland; bone; lymph node; bone marrow; tonsil; pharynx; spleen; salivary gland; esophagus; adrenal gland; vascular; umbilical cord; nerve; ganglia; bladder; adipose tissue; pineal gland; mouth; pituitary gland; thyroid; spinal cord; amniotic fluid; larynx; parathyroid; trachea; ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q13.12
UniSTS entry: Chr 12 RH48063 [Map Viewer]
UniSTS entry: Chr 12 PMC154451P2
UniSTS entry: Chr 12 G60179
UniSTS entry: Chr 12 STS-D51277
UniSTS entry: Chr 12 D11S4432
UniSTS entry: Chr 12 D5Arb10
UniSTS entry: Chr 12 Tuba8
UniSTS entry: Chr 12 D12S1921
UniSTS entry: Tuba1a
UniSTS entry: G31545
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (34)

AF081484.1 Homo sapiens alpha-tubulin isoform 1 mRNA, complete cds P
K00558.1 human alpha-tubulin mRNA, complete cds P
NM_006082.2 Homo sapiens tubulin, alpha 1b (TUBA1B), mRNA PA
AY533484.1 Homo sapiens tubulin alpha-1 (TUBA1) mRNA, partial cds P
BC071904.1 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:88583 IMAGE:6089096), complete cds PA
AK026516.1 Homo sapiens cDNA: FLJ22863 fis, clone KAT01983, highly similar to HUMTUBAK human alpha-tubulin mRNA PA
AK026632.1 Homo sapiens cDNA: FLJ22979 fis, clone KAT11379, highly similar to HUMTUBAK human alpha-tubulin mRNA PA
DQ400107.1 Homo sapiens alpha tubulin (K-ALPHA-1) mRNA, complete cds P
BC001128.1 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:2457 IMAGE:2964447), complete cds PA
BC000696.2 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:2215 IMAGE:3349131), complete cds PA
BC006481.1 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:4387 IMAGE:2905305), complete cds PA
BC006379.2 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:12832 IMAGE:4100566), complete cds PA
BC008659.2 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:9918 IMAGE:3871729), complete cds PA
BC009314.2 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:16616 IMAGE:4111591), complete cds PA
BC010494.1 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:17433 IMAGE:3445903), complete cds PA
BC009513.2 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:4760 IMAGE:3537827), complete cds PA
BC009512.2 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:4753 IMAGE:3537301), complete cds PA
BC009509.2 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:4689 IMAGE:3533174), complete cds PA
BC011572.1 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:20231 IMAGE:4561240), complete cds PA
BC017004.1 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:22108 IMAGE:4430457), complete cds PA
AK057773.1 Homo sapiens cDNA FLJ25044 fis, clone CBL03486, highly similar to TUBULIN ALPHA-1 CHAIN P
AK056693.1 Homo sapiens cDNA FLJ32131 fis, clone PEBLM2000267, highly similar to Tubulin alpha-ubiquitous chain P
BC015883.2 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:10192 IMAGE:3909374), complete cds PA
BC021564.1 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:31891 IMAGE:4579604), complete cds PA
AK289354.1 Homo sapiens cDNA FLJ78587 complete cds P
BC030820.1 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:23826 IMAGE:4277263), complete cds PA
AK098771.1 Homo sapiens cDNA FLJ25905 fis, clone CBR04587, highly similar to TUBULIN ALPHA-1 CHAIN P
AK098635.1 Homo sapiens cDNA FLJ25769 fis, clone TST06404, highly similar to TUBULIN ALPHA-1 CHAIN P
AK098357.1 Homo sapiens cDNA FLJ25491 fis, clone CBR00773, highly similar to TUBULIN ALPHA-1 CHAIN P
AK094717.1 Homo sapiens cDNA FLJ37398 fis, clone BRAMY2027467, highly similar to Tubulin alpha-ubiquitous chain P
AK293337.1 Homo sapiens cDNA FLJ60097 complete cds, highly similar to Tubulin alpha-ubiquitous chain P
BC018948.2 Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone IMAGE:4130515) PA
S62639.1 alpha-tubulin {EST} [human, mRNA Partial, 337 nt] P
Z36832.1 H.sapiens (xs31) mRNA, 835bp P

EST sequences (10 of 15923) [Show all sequences]

AA984845.1 Clone IMAGE:1630715 brain 3' read P
AA985223.1 Clone IMAGE:1629405 brain 3' read
AI002963.1 Clone IMAGE:1699529 kidney 3' read P
AI004607.1 Clone IMAGE:1625291 embryonic tissue 3' read P
AI027993.1 Clone IMAGE:1646114 parathyroid 3' read P
AI031965.1 Clone IMAGE:1650734 parathyroid 3' read PA
AI034278.1 Clone IMAGE:1663528 skin 3' read PA
AI040414.1 Clone IMAGE:1646417 parathyroid 3' read P
AI077862.1 Clone IMAGE:1665516 skin 3' read PA
AI081437.1 Clone IMAGE:1680361 skin 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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