> Solute carrier family 39 (zinc transporter), member 13 (SLC39A13)
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UGID:914411     UniGene Hs.523664     Homo sapiens (human)   SLC39A13 Order cDNA clone, Links
Solute carrier family 39 (zinc transporter), member 13 (SLC39A13)

Human protein-coding gene SLC39A13. Represented by 323 ESTs from 157 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 914411 - Hs.523664]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001121697.1 SLC39A13 gene product H. sapiens 100.0 370
XP_001107140.1 PREDICTED: zinc transporter ZIP13-like isoform 5 M. mulatta 99.7 363
NP_080997.1 Slc39a13 gene product M. musculus 92.5 360
NP_001005306.3 slc39a13 gene product D. rerio 67.0 350
NP_733319.1 CG7816, isoform A D. melanogaster 56.7 319
NP_509719.2 Protein C14H10.1 C. elegans 49.0 155
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_003313058.1 PREDICTED: zinc transporter ZIP13 P. troglodytes 99.5 378
XP_003909975.1 PREDICTED: zinc transporter ZIP13 isoform 1 P. anubis 99.5 370

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; pancreas; adrenal gland; thyroid; mouth; vascular; thymus; eye; testis; mixed; intestine; lung; adipose tissue; uncharacterized tissue; muscle; embryonic tissue; uterus; skin; kidney; bone; blood; cervix; mammary gland; bone marrow; bladder; ascites; connective tissue; stomach; ovary; tonsil; esophagus; pituitary gland; lymph; ganglia; heart; salivary gland; liver; umbilical cord; lymph node; amniotic fluid; prostate; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p11.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AL133581.1 Homo sapiens mRNA; cDNA DKFZp434A109 (from clone DKFZp434A109) PA
BC008853.2 Homo sapiens solute carrier family 39 (zinc transporter), member 13, mRNA (cDNA clone MGC:16573 IMAGE:4100291), complete cds PA
BC019016.2 Homo sapiens solute carrier family 39 (zinc transporter), member 13, mRNA (cDNA clone MGC:20695 IMAGE:4100057), complete cds PA
NM_001128225.2 Homo sapiens solute carrier family 39 (zinc transporter), member 13 (SLC39A13), transcript variant 1, mRNA PA
AK098651.1 Homo sapiens cDNA FLJ25785 fis, clone TST06832 P
NM_152264.4 Homo sapiens solute carrier family 39 (zinc transporter), member 13 (SLC39A13), transcript variant 2, mRNA PA

EST sequences (10 of 323) [Show all sequences]

AA985603.1 Clone IMAGE:1593009 kidney 3' read
AA904900.1 Clone IMAGE:1504145 mixed 3' read
AI016528.1 Clone IMAGE:1618419 testis 3' read A
AI081131.1 Clone IMAGE:1680283 skin 3' read A
AI089315.1 Clone IMAGE:1696417 uterus 3' read A
AI090554.1 Clone IMAGE:1691567 heart 3' read A
AI147736.1 Clone IMAGE:1703257 brain 3' read A
BX099569.1 Clone IMAGp998N24112_;_IMAGE:121175 mixed
AI205166.1 Clone IMAGE:1953844 brain 3' read A
AI269591.1 Clone IMAGE:1847892 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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