Signaling lymphocytic activation molecule family member 1 (SLAMF1)

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UGID:914407 UniGene Hs.523660 Homo sapiens (human) SLAMF1

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Signaling lymphocytic activation molecule family member 1 (SLAMF1)

Human protein-coding gene SLAMF1. Represented by 84 ESTs from 33 cDNA libraries. Corresponds to reference sequence NM_003037.2. [UniGene 914407 - Hs.523660]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_513924.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: signaling lymphocytic activation molecule	P. troglodytes	100.0	334
NP_003028.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SLAMF1 gene product	H. sapiens	100.0	334
NP_038758.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Slamf1 gene product	M. musculus	60.9	342
Other hits (2 of 9) [Show all]		Species	Id(%)	Len(aa)
XP_003892982.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: signaling lymphocytic activation molecule	P. anubis	98.1	268
XP_001117605.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: signaling lymphocytic activation molecule-like	M. mulatta	97.9	334

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	thymus; lymph node; heart; kidney; uncharacterized tissue; mixed; connective tissue; placenta; blood; muscle; pharynx; mammary gland; uterus; trachea; eye; prostate; bone

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	1
Map position:	1q23.3
UniSTS entry:	Chr 1	RH79145
UniSTS entry:	Chr 1	RH18033
UniSTS entry:	Chr 1	SGC35581	[Map Viewer]
UniSTS entry:	Chr 1	G34872
UniSTS entry:	Chr 1	SLAM_4157

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

NM_003037.2	Homo sapiens signaling lymphocytic activation molecule family member 1 (SLAMF1), mRNA	PA
U33017.1	Human signaling lymphocytic activation molecule (SLAM) mRNA, complete cds	P
BC110349.1	Homo sapiens cDNA clone IMAGE:5212273, containing frame-shift errors	PA
BC132792.1	Homo sapiens signaling lymphocytic activation molecule family member 1, mRNA (cDNA clone MGC:164423 IMAGE:40146814), complete cds	P
BC012602.1	Homo sapiens signaling lymphocytic activation molecule family member 1, mRNA (cDNA clone IMAGE:4296969), complete cds	PA
AY040554.1	Homo sapiens SLAM mRNA, complete cds	P
AK314244.1	Homo sapiens cDNA, FLJ94989, highly similar to Homo sapiens signaling lymphocytic activation molecule family member 1 (SLAMF1), mRNA	P
AK311666.1	Homo sapiens cDNA, FLJ18708	P
AK304237.1	Homo sapiens cDNA FLJ57169 complete cds, highly similar to Signaling lymphocytic activation molecule precursor	P
BC144500.1	Homo sapiens cDNA clone IMAGE:9053027, containing frame-shift errors	P
BC144498.1	Homo sapiens cDNA clone IMAGE:9053025	P
BC144499.1	Homo sapiens cDNA clone IMAGE:9053026, containing frame-shift errors	P

EST sequences (10 of 84) [Show all sequences]

AA995022.1	Clone IMAGE:1626951	mixed	3' read	A
AA904431.1	Clone IMAGE:1507160	mixed	3' read	A
AI224384.1	Clone IMAGE:2000513	lymph node	3' read	A
CB989224.1	Clone IMAGE:30341323	placenta	5' read	P
CB961154.1	Clone IMAGE:30343851	placenta	5' read	P
BX329073.2	Clone CS0DI065YO02	placenta	3' read	P
BX348937.2	Clone CS0DI065YO02	placenta	5' read	P
BX348938.1	Clone CS0DI065YO02	placenta	5' read	P
CD639949.1	Clone IMAGE:30418715	blood	5' read	P
BX482030.1	Clone DKFZp686K13228	muscle	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria