> Sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 (SPOCK2)
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UGID:913756     UniGene Hs.523009     Homo sapiens (human)   SPOCK2 Order cDNA clone, Links
Sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 (SPOCK2)

Human protein-coding gene SPOCK2. Represented by 456 ESTs from 180 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 913756 - Hs.523009]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001136277.1 PREDICTED: testican-2 isoform 3 P. troglodytes 100.0 423
NP_001231879.1 SPOCK2 gene product H. sapiens 100.0 423
NP_443720.1 testican-2 precursor M. musculus 95.7 422
NP_001086292.1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 precursor X. laevis 87.2 412
XP_002664230.1 PREDICTED: si:dkeyp-115d2.5 D. rerio 74.2 418
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_001105299.1 PREDICTED: testican-2 isoform 1 M. mulatta 99.1 423
XP_003903854.1 PREDICTED: testican-2 P. anubis 99.1 423

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uncharacterized tissue; kidney; liver; muscle; eye; lung; lymph; spleen; blood; uterus; ovary; intestine; mixed; stomach; mammary gland; larynx; tonsil; ear; ascites; connective tissue; ganglia; thyroid; prostate; nerve; thymus; lymph node; pancreas; adrenal gland; spinal cord; mouth; esophagus; embryonic tissue; skin; pituitary gland; adipose tissue; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10pter-q25.3
UniSTS entry: Chr 10 D10S1469 [Map Viewer]
UniSTS entry: Chr 10 RH125661
UniSTS entry: Chr 10 A009F10 [Map Viewer]
UniSTS entry: Chr 10 G32501
UniSTS entry: Chr 10 G59313
UniSTS entry: Chr 10 G43106
UniSTS entry: Chr 10 MARC_12153-12154:1004708400:3
UniSTS entry: Chr 10 SHGC-32487 [Map Viewer]
UniSTS entry: Chr 10 D10S1334E
UniSTS entry: Chr 10 D10S1323E [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AJ001453.1 Homo sapiens mRNA for testican-2 P
AY358921.1 Homo sapiens clone DNA39984 SPOCK2 (UNQ269) mRNA, complete cds PA
NM_014767.2 Homo sapiens sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 (SPOCK2), transcript variant 2, mRNA PA
BC127952.1 Homo sapiens cDNA clone IMAGE:40132531
BC127951.1 Homo sapiens cDNA clone IMAGE:40132530
AK307091.1 Homo sapiens cDNA, FLJ97039
AK294008.1 Homo sapiens cDNA FLJ56663 complete cds, highly similar to Testican-2 precursor P
NM_001134434.1 Homo sapiens sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 (SPOCK2), transcript variant 1, mRNA
BC023558.2 Homo sapiens sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2, mRNA (cDNA clone MGC:19496 IMAGE:4137728), complete cds PA
D87465.1 Homo sapiens mRNA for KIAA0275 gene, partial cds P
NM_001244950.1 Homo sapiens sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 (SPOCK2), transcript variant 3, mRNA PA

EST sequences (10 of 456) [Show all sequences]

AI015469.1 Clone IMAGE:1641166 testis 3' read
AA922448.1 Clone IMAGE:1551823 uncharacterized tissue 3' read
AI024341.1 Clone IMAGE:1643180 testis 3' read
AI024694.1 Clone IMAGE:1642497 testis 3' read A
R19528.1 Clone IMAGE:33710 brain 5' read
AI051257.1 Clone IMAGE:1669198 brain 3' read A
AA910596.1 Clone IMAGE:1518053 uncharacterized tissue 3' read A
AI138758.1 Clone IMAGE:1737916 testis 3' read PA
CB048807.1 Clone IMAGE:3270832 prostate 3' read A
CB048808.1 Clone IMAGE:3270832 prostate 5' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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