> Clathrin, light chain A (CLTA)
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UGID:912861     UniGene Hs.522114     Homo sapiens (human)   CLTA Order cDNA clone, Links
Clathrin, light chain A (CLTA)

Human protein-coding gene CLTA. Represented by 958 ESTs from 322 cDNA libraries. Corresponds to 6 reference sequences (different isoforms). [UniGene 912861 - Hs.522114]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003911554.1 PREDICTED: clathrin light chain A P. anubis 100.0 247
NP_009027.1 CLTA gene product H. sapiens 100.0 247
NP_001073854.1 clathrin light chain A isoform b M. musculus 99.2 247
NP_001090492.1 clathrin, light chain A X. laevis 85.2 202
NP_998210.1 clta gene product D. rerio 79.9 234
Other hits (2 of 26) [Show all]SpeciesId(%)Len(aa)
XP_003639442.1 PREDICTED: clathrin light chain A-like isoform 3 C. lupus familiaris 99.2 247
XP_003122048.2 PREDICTED: clathrin light chain A isoform 1, partial S. scrofa 99.2 117

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; skin; lung; placenta; mixed; pancreas; uterus; embryonic tissue; eye; lymph; uncharacterized tissue; intestine; testis; mammary gland; kidney; ovary; prostate; lymph node; connective tissue; liver; bone; nerve; cervix; heart; trachea; bladder; spinal cord; tonsil; mouth; pharynx; ascites; salivary gland; blood; muscle; stomach; adrenal gland; parathyroid; bone marrow; amniotic fluid; pituitary gland; ganglia; spleen; adipose tissue; umbilical cord; vascular; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9p13
UniSTS entry: Chr 9 RH67858
UniSTS entry: Chr 9 STS-M20471
UniSTS entry: Chr 9 G43533
UniSTS entry: Chr 9 RH74929
UniSTS entry: Chr 9 RH79677
UniSTS entry: Chr 9 AV026556
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

BT007170.1 Homo sapiens clathrin, light polypeptide (Lca) mRNA, complete cds P
NM_001833.3 Homo sapiens clathrin, light chain A (CLTA), transcript variant 1, mRNA PA
NM_007096.3 Homo sapiens clathrin, light chain A (CLTA), transcript variant 2, mRNA PA
M20471.1 Human brain-type clathrin light-chain a mRNA, complete cds P
M20472.1 Human lymphocyte clathrin light-chain A mRNA, complete cds P
DQ270158.1 Homo sapiens brain-specific clathrin light polypeptide mRNA, complete cds, alternatively spliced P
AK225153.1 Homo sapiens mRNA for clathrin, light polypeptide A isoform b variant, clone: CBL08872 PA
NM_001076677.2 Homo sapiens clathrin, light chain A (CLTA), transcript variant 3, mRNA PA
BC009201.2 Homo sapiens clathrin, light chain (Lca), mRNA (cDNA clone MGC:15367 IMAGE:3944942), complete cds PA
BC019287.1 Homo sapiens clathrin, light chain (Lca), mRNA (cDNA clone MGC:4014 IMAGE:2823495), complete cds PA
AK291078.1 Homo sapiens cDNA FLJ77116 complete cds, highly similar to Homo sapiens clathrin, light polypeptide (Lca) (CLTA), transcript variant nonbrain, mRNA P
AK295692.1 Homo sapiens cDNA FLJ60566 complete cds, highly similar to Clathrin light chain A PA
NM_001184761.1 Homo sapiens clathrin, light chain A (CLTA), transcript variant 5, mRNA P
NM_001184762.1 Homo sapiens clathrin, light chain A (CLTA), transcript variant 6, mRNA P
NM_001184760.1 Homo sapiens clathrin, light chain A (CLTA), transcript variant 4, mRNA P

EST sequences (10 of 958) [Show all sequences]

AA903212.1 Clone IMAGE:1517756 uncharacterized tissue 3' read A
AA992132.1 Clone IMAGE:1622076 embryonic tissue 3' read A
AA995293.1 Clone IMAGE:1606577 kidney 3' read A
AA996351.1 Clone IMAGE:1603740 lung 3' read A
AI001121.1 Clone IMAGE:1613199 uncharacterized tissue 3' read A
AI050856.1 Clone IMAGE:1668948 brain 3' read A
AI080458.1 Clone IMAGE:1610774 uncharacterized tissue 3' read A
AI094712.1 Clone IMAGE:1670643 brain 3' read A
AI094923.1 Clone IMAGE:1687114 brain 3' read A
AI127260.1 Clone IMAGE:1705425 heart 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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