Zinc finger protein 517 (ZNF517)

Restricted Expression:

liver tumor [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

liver; brain; bladder; thymus; esophagus; eye; spleen; embryonic tissue; mixed; lymph; uncharacterized tissue; pancreas

NCBI

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Finding cDNAs

UGID:912689 UniGene Hs.521942 Homo sapiens (human) ZNF517

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Zinc finger protein 517 (ZNF517)

Human protein-coding gene ZNF517. Represented by 57 ESTs from 16 cDNA libraries. EST representation biased toward liver tumor. Corresponds to reference sequence NM_213605.2. [UniGene 912689 - Hs.521942]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_998770.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ZNF517 gene product	H. sapiens	100.0	491
NP_001007569.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	zinc finger protein 251	M. musculus	49.9	603
XP_003198444.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: gastrula zinc finger protein XlCGF57.1-like	D. rerio	47.0	270
Other hits (2 of 25) [Show all]		Species	Id(%)	Len(aa)
XP_001158088.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: zinc finger protein 517 isoform 1	P. troglodytes	98.2	486
XP_001095597.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: zinc finger protein 517	M. mulatta	95.9	487

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	8
Map position:	8q24.3
UniSTS entry:	Chr 1	L30021

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_213605.2	Homo sapiens zinc finger protein 517 (ZNF517), mRNA	P
BC126161.1	Homo sapiens zinc finger protein 517, mRNA (cDNA clone MGC:161439 IMAGE:8991877), complete cds	P
AK096527.1	Homo sapiens cDNA FLJ39208 fis, clone OCBBF2006030	P
BC143922.1	Homo sapiens zinc finger protein 517, mRNA (cDNA clone IMAGE:9052440), partial cds	P

EST sequences (10 of 57) [Show all sequences]

BX096352.1	Clone IMAGp998H21326_;_IMAGE:177860	brain
BX113938.1	Clone IMAGp998N161025_;_IMAGE:436047	mixed
CD721993.1	Clone oj04b07	eye	5' read
CN264592.1		embryonic tissue	5' read
H46163.1	Clone IMAGE:177860	brain	5' read
H46164.1	Clone IMAGE:177860	brain	3' read
H46216.1	Clone IMAGE:177959	brain	5' read
H46217.1	Clone IMAGE:177959	brain	3' read
CR987942.1	Clone RZPDp9016C177	uncharacterized tissue	5' read	P
H50073.1	Clone IMAGE:179060	brain	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria