Solute carrier family 12 (potassium/chloride transporters), member 9 (SLC12A9)

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UGID:911834 UniGene Hs.521087 Homo sapiens (human) SLC12A9

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Solute carrier family 12 (potassium/chloride transporters), member 9 (SLC12A9)

Human protein-coding gene SLC12A9. Represented by 191 ESTs from 104 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 911834 - Hs.521087]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_064631.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SLC12A9 gene product	H. sapiens	100.0	913
XP_003318707.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: solute carrier family 12 member 9	P. troglodytes	99.8	913
NP_113583.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Slc12a9 gene product	M. musculus	95.4	913
NP_001090251.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	solute carrier family 12 member 9	X. laevis	71.0	898
NP_001122020.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	solute carrier family 12 member 9	D. rerio	66.8	898
NP_001040799.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Protein T04B8.5, isoform c	C. elegans	50.2	480
NP_609887.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CG10413	D. melanogaster	49.9	609
Other hits (2 of 37) [Show all]		Species	Id(%)	Len(aa)
XP_003895856.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: solute carrier family 12 member 9	P. anubis	99.3	913
XP_001105778.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: solute carrier family 12 member 9-like isoform 5	M. mulatta	98.7	892

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	uncharacterized tissue; brain; placenta; embryonic tissue; lung; kidney; pancreas; nerve; uterus; skin; vascular; prostate; mixed; cervix; stomach; intestine; testis; eye; blood; bladder; heart; lymph node; connective tissue; bone; ovary; spleen; ascites; mammary gland; thymus

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	7
Map position:	7q22
UniSTS entry:	Chr 7	D7S2888
UniSTS entry:		RH101934
UniSTS entry:	Chr 1	D10S16

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK128873.1	Homo sapiens cDNA FLJ46905 fis, clone PLACE6000012	P
NM_020246.3	Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 9 (SLC12A9), transcript variant 1, mRNA	PA
AF284422.1	Homo sapiens cation-chloride cotransporter-interacting protein mRNA, complete cds	P
BC000154.2	Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 9, mRNA (cDNA clone MGC:5319 IMAGE:2900382), complete cds	PA
AB033284.1	Homo sapiens hCCC6 mRNA for cation chloride cotransporter 6, complete cds	PA
AK026624.1	Homo sapiens cDNA: FLJ22971 fis, clone KAT10788	A
AK301411.1	Homo sapiens cDNA FLJ61603 complete cds, highly similar to Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 9 (SLC12A9), mRNA	P
NM_001267814.1	Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 9 (SLC12A9), transcript variant 3, mRNA	PA
NM_001267812.1	Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 9 (SLC12A9), transcript variant 2, mRNA	PA

EST sequences (10 of 191) [Show all sequences]

AI024733.1	Clone IMAGE:1643278	testis	3' read	A
AI089415.1	Clone IMAGE:1685662	brain	3' read	A
CA976065.1	Clone IMAGE:6202475	nerve	5' read
AI122588.1	Clone IMAGE:1693840	heart	3' read	A
AI123001.1	Clone IMAGE:1509888	mixed	3' read	A
AI208223.1	Clone IMAGE:1838582	testis	3' read
AI302617.1	Clone IMAGE:1900941	kidney	3' read	A
AI368390.1	Clone IMAGE:2011366	brain	3' read
AI380605.1	Clone IMAGE:2107570	uncharacterized tissue	3' read
AI421651.1	Clone IMAGE:2099027	brain	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria