> Tight junction associated protein 1 (peripheral) (TJAP1)
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UGID:910892     UniGene Hs.520145     Homo sapiens (human)   TJAP1 Order cDNA clone, Links
Tight junction associated protein 1 (peripheral) (TJAP1)

Human protein-coding gene TJAP1. Represented by 354 ESTs from 165 cDNA libraries. Corresponds to 7 reference sequences (different isoforms). [UniGene 910892 - Hs.520145]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001139488.1 TJAP1 gene product H. sapiens 100.0 556
XP_001138031.1 PREDICTED: tight junction-associated protein 1 isoform 1 P. troglodytes 99.6 556
NP_083027.1 Tjap1 gene product M. musculus 90.5 538
NP_001090155.1 uncharacterized protein LOC735235 X. laevis 67.5 589
XP_001921685.3 PREDICTED: tight junction-associated protein 1-like D. rerio 60.5 665
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_003897688.1 PREDICTED: tight junction-associated protein 1 isoform 2 P. anubis 98.2 559
NP_001179348.1 tight junction-associated protein 1 B. taurus 95.8 547

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uncharacterized tissue; mouth; embryonic tissue; mammary gland; umbilical cord; heart; cervix; adrenal gland; skin; spleen; prostate; esophagus; stomach; thymus; connective tissue; uterus; placenta; kidney; lung; blood; liver; pancreas; mixed; ovary; trachea; intestine; pharynx; ascites; bone; muscle; lymph; eye; thyroid; lymph node; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.1
UniSTS entry: Chr 6 D6S2126 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

BC046239.1 Homo sapiens tight junction associated protein 1 (peripheral), mRNA (cDNA clone MGC:52276 IMAGE:4906152), complete cds PA
AL117398.1 Homo sapiens mRNA; cDNA DKFZp434D111 (from clone DKFZp434D111) PA
AK123398.1 Homo sapiens cDNA FLJ41404 fis, clone BRHIP1000258 P
BC064401.1 Homo sapiens tight junction associated protein 1 (peripheral), mRNA (cDNA clone MGC:70624 IMAGE:5539930), complete cds PA
AK024269.1 Homo sapiens cDNA FLJ14207 fis, clone NT2RP3003185, weakly similar to TROPOMYOSIN 1, FUSION PROTEIN 33 P
AK225787.1 Homo sapiens mRNA for tight junction protein 4 variant, clone: FCC131G12 P
AJ420477.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1609912 PA
NM_080604.2 Homo sapiens tight junction associated protein 1 (peripheral) (TJAP1), transcript variant 4, mRNA PA
AK309119.1 Homo sapiens cDNA, FLJ99160 P
AK308866.1 Homo sapiens cDNA, FLJ98907 P
AK307483.1 Homo sapiens cDNA, FLJ97431 P
AK074241.1 Homo sapiens cDNA FLJ23661 fis, clone HEP01241 PA
NM_001146020.1 Homo sapiens tight junction associated protein 1 (peripheral) (TJAP1), transcript variant 6, mRNA PA
NM_001146019.1 Homo sapiens tight junction associated protein 1 (peripheral) (TJAP1), transcript variant 5, mRNA PA
NM_001146018.1 Homo sapiens tight junction associated protein 1 (peripheral) (TJAP1), transcript variant 3, mRNA PA
NM_001146017.1 Homo sapiens tight junction associated protein 1 (peripheral) (TJAP1), transcript variant 2, mRNA PA
NM_001146016.1 Homo sapiens tight junction associated protein 1 (peripheral) (TJAP1), transcript variant 1, mRNA PA
NR_027394.1 Homo sapiens tight junction associated protein 1 (peripheral) (TJAP1), transcript variant 7, non-coding RNA PA

EST sequences (10 of 354) [Show all sequences]

AI004204.1 Clone IMAGE:1624461 embryonic tissue 3' read A
AI089110.1 Clone IMAGE:1634468 mixed 3' read A
AI128104.1 Clone IMAGE:1711398 uterus 3' read A
AI131226.1 Clone IMAGE:1709744 heart 3' read A
CB044875.1 Clone IMAGE:3217894 intestine 3' read A
CB044876.1 Clone IMAGE:3217894 intestine 5' read P
AI150387.1 Clone IMAGE:1752536 testis 3' read A
AI254749.1 Clone IMAGE:1962461 intestine 3' read
CB110984.1 Clone L5HLK1-9-C02 liver 5' read P
AI275632.1 Clone IMAGE:1891981 placenta 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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