> Retinoblastoma binding protein 5 (RBBP5)
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UGID:909977     UniGene Hs.519230     Homo sapiens (human)   RBBP5 Order cDNA clone, Links
Retinoblastoma binding protein 5 (RBBP5)

Human protein-coding gene RBBP5. Represented by 153 ESTs from 100 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 909977 - Hs.519230]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003893283.1 PREDICTED: retinoblastoma-binding protein 5 isoform 1 P. anubis 100.0 537
NP_005048.2 RBBP5 gene product H. sapiens 100.0 537
XP_848552.1 PREDICTED: retinoblastoma-binding protein 5 isoform 2 C. lupus familiaris 100.0 537
XP_003482703.1 PREDICTED: retinoblastoma-binding protein 5 isoform 2 S. scrofa 100.0 537
NP_001076871.1 RBBP5 gene product B. taurus 100.0 537
XP_004013603.1 PREDICTED: retinoblastoma-binding protein 5 isoform 1 O. aries 100.0 537
XP_002717493.1 PREDICTED: retinoblastoma binding protein 5 O. cuniculus 100.0 537
XP_514134.4 PREDICTED: retinoblastoma-binding protein 5 P. troglodytes 99.8 541
NP_766105.2 Rbbp5 gene product M. musculus 99.8 537
NP_001100644.1 retinoblastoma-binding protein 5 R. norvegicus 99.8 537
XP_003364974.1 PREDICTED: retinoblastoma-binding protein 5 isoform 2 E. caballus 99.8 537
XP_001365126.1 PREDICTED: retinoblastoma-binding protein 5 isoform 1 M. domestica 99.6 537
XP_001507579.2 PREDICTED: retinoblastoma-binding protein 5 O. anatinus 99.6 474
NP_001086675.1 retinoblastoma binding protein 5 X. laevis 97.6 500
NP_956539.1 rbbp5 gene product D. rerio 97.1 510
NP_649209.1 Rbbp5 D. melanogaster 80.5 488
NP_188743.3 transducin/WD40 domain-containing protein A. thaliana 50.6 168
NP_495222.2 Protein RBBP-5 C. elegans 49.8 261
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_003212941.1 PREDICTED: retinoblastoma-binding protein 5-like M. gallopavo 99.4 533
XP_002808301.1 PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-binding protein 5-like M. mulatta 99.4 498

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; lung; kidney; pharynx; thyroid; testis; connective tissue; uncharacterized tissue; lymph node; pancreas; placenta; uterus; mixed; blood; mammary gland; umbilical cord; mouth; vascular; thymus; liver; intestine; lymph; eye; skin; trachea; stomach; prostate; bone; bone marrow; cervix; muscle
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q32
UniSTS entry: Chr 1 SHGC-35381 [Map Viewer]
UniSTS entry: Chr 1 D16S325
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 D11S3316
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BC053856.1 Homo sapiens retinoblastoma binding protein 5, mRNA (cDNA clone MGC:61473 IMAGE:5576406), complete cds PA
NM_005057.3 Homo sapiens retinoblastoma binding protein 5 (RBBP5), transcript variant 1, mRNA P
BC075060.2 Homo sapiens retinoblastoma binding protein 5, mRNA (cDNA clone MGC:103967 IMAGE:30915368), complete cds P
BC075059.2 Homo sapiens retinoblastoma binding protein 5, mRNA (cDNA clone MGC:104129 IMAGE:30915584), complete cds P
X85134.1 H.sapiens RBQ-3 mRNA PA
AK290137.1 Homo sapiens cDNA FLJ75510 complete cds, highly similar to Homo sapiens retinoblastoma binding protein 5, mRNA P
AK297540.1 Homo sapiens cDNA FLJ59722 complete cds, highly similar to Retinoblastoma-binding protein 5 P
AK296978.1 Homo sapiens cDNA FLJ60295 complete cds, highly similar to Retinoblastoma-binding protein 5 P
BC037284.2 Homo sapiens retinoblastoma binding protein 5, mRNA (cDNA clone MGC:33095 IMAGE:5266066), complete cds PA
NM_001193273.1 Homo sapiens retinoblastoma binding protein 5 (RBBP5), transcript variant 3, mRNA P
NM_001193272.1 Homo sapiens retinoblastoma binding protein 5 (RBBP5), transcript variant 2, mRNA P

EST sequences (10 of 153) [Show all sequences]

BX096879.1 Clone IMAGp998G082038_;_IMAGE:824863 lymph node
CB125817.1 Clone L5HLK1s1-30-E11 liver 5' read P
CB133829.1 Clone L9SNU354-7-F05 liver 5' read
AI468729.1 Clone IMAGE:2125467 mixed 3' read
AI633226.1 Clone IMAGE:2287930 uterus 3' read
BX357210.2 Clone CS0DI022YJ22 placenta 5' read P
BX369123.2 Clone CS0DI022YJ22 placenta 5' read P
BX383013.2 Clone CS0DJ004YG02 blood 3' read P
BX372019.2 Clone CS0DJ004YG02 blood 3' read P
BX411763.2 Clone CL0BB006ZD04 uncharacterized tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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