> Ubiquitin-conjugating enzyme E2D 3 (UBE2D3)
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UGID:909520     UniGene Hs.518773     Homo sapiens (human)   UBE2D3 Order cDNA clone, Links
Ubiquitin-conjugating enzyme E2D 3 (UBE2D3)

Human protein-coding gene UBE2D3. Represented by 2087 ESTs from 519 cDNA libraries. Corresponds to 9 reference sequences (different isoforms). [UniGene 909520 - Hs.518773]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_871622.1 UBE2D3 gene product H. sapiens 100.0 148
NP_079632.1 ubiquitin-conjugating enzyme E2 D3 M. musculus 100.0 146
NP_112516.1 Ube2d3 gene product R. norvegicus 100.0 146
XP_003340663.1 PREDICTED: ubiquitin-conjugating enzyme E2 D3-like M. domestica 100.0 146
XP_002196087.1 PREDICTED: ubiquitin-conjugating enzyme E2D 3 T. guttata 100.0 146
NP_001026324.1 UBE2D3 gene product G. gallus 100.0 146
XP_001109666.1 PREDICTED: ubiquitin-conjugating enzyme E2 D3-like isoform 2 M. mulatta 100.0 146
XP_003899075.1 PREDICTED: ubiquitin-conjugating enzyme E2 D3 isoform 1 P. anubis 100.0 146
XP_003129334.1 PREDICTED: ubiquitin-conjugating enzyme E2 D3-like isoform 1 S. scrofa 100.0 146
NP_001068603.1 UBE2D3 gene product B. taurus 100.0 146
XP_004005929.1 PREDICTED: ubiquitin-conjugating enzyme E2 D3-like O. aries 100.0 146
XP_002717256.1 PREDICTED: ubiquitin-conjugating enzyme E2D 3 isoform 1 O. cuniculus 100.0 146
XP_003364705.1 PREDICTED: ubiquitin-conjugating enzyme E2 D3-like E. caballus 100.0 142
NP_957253.1 zgc:77149 gene product D. rerio 99.3 146
NP_001084434.1 ubiquitin-conjugating enzyme E2 D2 X. laevis 99.3 146
NP_731941.1 effete, isoform A D. melanogaster 98.0 146
NP_502065.1 Protein LET-70 C. elegans 96.6 146
XP_959933.2 hypothetical protein NCU02289 N. crassa 89.1 146
NP_568835.1 ubiquitin-conjugating enzyme E2 30 A. thaliana 85.1 147
NP_009638.1 E2 ubiquitin-conjugating protein UBC4 S. cerevisiae 83.8 147
XP_001699308.1 ubiquitin conjugating enzyme C. reinhardtii 81.1 147
Other hits (2 of 56) [Show all]SpeciesId(%)Len(aa)
XP_003205816.1 PREDICTED: ubiquitin-conjugating enzyme E2 D3-like, partial M. gallopavo 99.4 158
XP_003220119.1 PREDICTED: ubiquitin-conjugating enzyme E2 D2-like A. carolinensis 99.3 146

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uterus; embryonic tissue; uncharacterized tissue; placenta; lung; kidney; intestine; thymus; liver; prostate; skin; blood; mixed; connective tissue; mammary gland; eye; pancreas; trachea; vascular; heart; stomach; spleen; adrenal gland; bladder; bone marrow; lymph node; ovary; cervix; bone; adipose tissue; mouth; ascites; muscle; pituitary gland; thyroid; pharynx; parathyroid; esophagus; umbilical cord; ear; nerve; ganglia; salivary gland; peritoneum; tonsil; lymph
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q24
UniSTS entry: Chr 3 RH125441
UniSTS entry: Chr 4 G19979
UniSTS entry: Chr 4 RH16693
UniSTS entry: Chr 4 SHGC-37168
UniSTS entry: Chr 4 STS-H95079
UniSTS entry: Chr 4 SHGC-67354
UniSTS entry: G34480
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

NM_181893.1 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), transcript variant 9, mRNA PA
NM_181892.2 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), transcript variant 8, mRNA PA
NM_181891.1 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), transcript variant 7, mRNA PA
NM_181890.1 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), transcript variant 6, mRNA PA
NM_181889.1 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), transcript variant 5, mRNA PA
NM_181888.2 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), transcript variant 4, mRNA PA
NM_181887.1 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), transcript variant 3, mRNA PA
NM_181886.2 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), transcript variant 2, mRNA PA
AK127304.1 Homo sapiens cDNA FLJ45372 fis, clone BRHIP3018278, highly similar to Ubiquitin-conjugating enzyme E2-17 kDa 3 (EC 6.3.2.19) P
AK124159.1 Homo sapiens cDNA FLJ42165 fis, clone THYMU2009516
NM_003340.5 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), transcript variant 1, mRNA PA
BC066917.1 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:87126 IMAGE:4792462), complete cds PA
CR456916.1 Homo sapiens full open reading frame cDNA clone RZPDo834H1015D for gene UBE2D3, ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast); complete cds, incl. stopcodon P
U39318.1 Human E2 ubiquitin conjugating enzyme UbcH5C (UBCH5C) mRNA, complete cds P
BC003395.1 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:5416 IMAGE:3447673), complete cds PA
AK315775.1 Homo sapiens cDNA, FLJ96889 P
AK095822.1 Homo sapiens cDNA FLJ38503 fis, clone HCHON2000056, highly similar to UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 3 (EC 6.3.2.19) P
AL833414.1 Homo sapiens mRNA; cDNA DKFZp313K1222 (from clone DKFZp313K1222) PA
AL050186.1 Homo sapiens mRNA; cDNA DKFZp586A0723 (from clone DKFZp586A0723) A
BC037894.2 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:43926 IMAGE:5275356), complete cds PA

EST sequences (10 of 2087) [Show all sequences]

AA971451.1 Clone IMAGE:1583229 mixed 3' read
AA972161.1 Clone IMAGE:1583989 mixed 3' read A
AA975081.1 Clone IMAGE:1555622 kidney 3' read A
AA977502.1 Clone IMAGE:1561071 mixed 3' read A
AA988124.1 Clone IMAGE:1604654 lung 3' read
AA904790.1 Clone IMAGE:1504085 mixed 3' read A
AI032628.1 Clone IMAGE:1647126 parathyroid 3' read A
AI042207.1 Clone IMAGE:1660743 mixed 3' read
AI057567.1 Clone IMAGE:1667418 parathyroid 3' read A
AI077282.1 Clone IMAGE:1667958 parathyroid 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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