Actin related protein 2/3 complex, subunit 5, 16kDa (ARPC5)

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UGID:909356 UniGene Hs.518609 Homo sapiens (human) ARPC5

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Actin related protein 2/3 complex, subunit 5, 16kDa (ARPC5)

Human protein-coding gene ARPC5. Represented by 1431 ESTs from 406 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 909356 - Hs.518609]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001257368.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ARPC5 gene product	H. sapiens	100.0	153
NP_080645.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Arpc5 gene product	M. musculus	100.0	150
NP_001020888.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Arpc5 gene product	R. norvegicus	100.0	150
XP_001366637.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: actin-related protein 2/3 complex subunit 5-like	M. domestica	100.0	150
NP_001233430.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ARPC5 gene product	P. troglodytes	100.0	150
XP_537159.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: actin-related protein 2/3 complex subunit 5	C. lupus familiaris	100.0	150
NP_001127829.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ARPC5 gene product	S. scrofa	100.0	150
XP_004013912.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: actin-related protein 2/3 complex subunit 5	O. aries	100.0	150
NP_001087450.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	actin related protein 2/3 complex, subunit 5, 16kDa	X. laevis	86.7	149
NP_919359.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	arpc5a gene product	D. rerio	86.0	149
NP_608693.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Actin-related protein 2/3 complex, subunit 5, isoform A	D. melanogaster	53.7	149
Other hits (2 of 22) [Show all]		Species	Id(%)	Len(aa)
XP_003893455.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: actin-related protein 2/3 complex subunit 5	P. anubis	99.3	153
NP_001030524.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ARPC5 gene product	B. taurus	99.3	150

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; placenta; uncharacterized tissue; uterus; embryonic tissue; intestine; testis; blood; mixed; lung; connective tissue; vascular; kidney; liver; skin; spleen; thymus; pharynx; muscle; ovary; prostate; esophagus; larynx; ascites; eye; pancreas; adrenal gland; thyroid; mouth; stomach; heart; bone; umbilical cord; lymph node; mammary gland; bladder; cervix; lymph; bone marrow; trachea; pituitary gland; tonsil; epididymis; salivary gland; ganglia; nerve; adipose tissue; parathyroid; pineal gland

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	1
Map position:	1q25.3
UniSTS entry:	Chr 1	RH12696
UniSTS entry:	Chr 1	RH76379
UniSTS entry:	Chr 6	RH78011

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK129598.1	Homo sapiens cDNA FLJ26087 fis, clone RCT05949, highly similar to ARP2/3 complex 16 kDa subunit	P
BC057237.1	Homo sapiens actin related protein 2/3 complex, subunit 5, 16kDa, mRNA (cDNA clone MGC:62039 IMAGE:3931697), complete cds	PA
NM_005717.3	Homo sapiens actin related protein 2/3 complex, subunit 5, 16kDa (ARPC5), transcript variant 1, mRNA	PA
BC034231.1	Homo sapiens cDNA clone IMAGE:5272633, with apparent retained intron	A
NM_001270439.1	Homo sapiens actin related protein 2/3 complex, subunit 5, 16kDa (ARPC5), transcript variant 2, mRNA	PA
AF006088.1	Homo sapiens Arp2/3 protein complex subunit p16-Arc (ARC16) mRNA, complete cds	PA
AF017807.1	Homo sapiens Arp2/3 complex 16kDa subunit (ARC16) mRNA, complete cds	P

EST sequences (10 of 1431) [Show all sequences]

AA961153.1	Clone IMAGE:1575713	intestine	3' read
AA864438.1	Clone IMAGE:1456544	kidney	3' read	A
AA922409.1	Clone IMAGE:1486382	mouth	3' read
AA983795.1	Clone IMAGE:1580941	mixed	3' read	A
AA989718.1	Clone IMAGE:1577428	spleen	3' read
AI001040.1	Clone IMAGE:1610176	mammary gland	3' read	A
R17008.1	Clone IMAGE:129846	mixed	3' read
AA909133.1	Clone IMAGE:1540879	mixed	3' read	A
AI014492.1	Clone IMAGE:1607301	mammary gland	3' read
R18310.1	Clone IMAGE:31033	brain	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria