> Coatomer protein complex, subunit gamma 1 (COPG1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:908997     UniGene Hs.518250     Homo sapiens (human)   COPG1 Order cDNA clone, Links
Coatomer protein complex, subunit gamma 1 (COPG1)

Human protein-coding gene COPG1. Represented by 896 ESTs from 351 cDNA libraries. Corresponds to reference sequence NM_016128.3. [UniGene 908997 - Hs.518250]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003906935.1 PREDICTED: coatomer subunit gamma-1 P. anubis 100.0 873
XP_001141317.1 PREDICTED: coatomer subunit gamma-1 isoform 1 P. troglodytes 100.0 873
NP_057212.1 COPG1 gene product H. sapiens 100.0 873
XP_002713207.1 PREDICTED: coatomer protein complex, subunit gamma 1-like O. cuniculus 99.8 873
XP_001488579.1 PREDICTED: coatomer subunit gamma E. caballus 99.5 873
NP_059505.1 Copg1 gene product M. musculus 99.0 873
NP_001083575.1 coatomer protein complex, subunit gamma 1 X. laevis 93.1 873
NP_571069.1 copg2 gene product D. rerio 87.3 872
NP_524608.1 gamma-coatomer protein, isoform A D. melanogaster 72.2 872
NP_001040988.1 Protein T14G10.5, isoform a C. elegans 64.5 868
NP_195171.2 coatomer subunit gamma A. thaliana 61.6 867
XP_001691193.1 gamma-cop C. reinhardtii 60.9 867
XP_964857.1 hypothetical protein NCU01992 N. crassa 58.6 645
NP_014112.1 Sec21p S. cerevisiae 48.4 254
Other hits (2 of 58) [Show all]SpeciesId(%)Len(aa)
XP_533723.2 PREDICTED: coatomer subunit gamma C. lupus familiaris 99.4 873
NP_001026992.1 Copg1 gene product R. norvegicus 98.9 873

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; skin; lung; intestine; uncharacterized tissue; nerve; embryonic tissue; larynx; bone marrow; heart; placenta; kidney; mouth; mammary gland; prostate; liver; thymus; ovary; ear; bladder; adrenal gland; stomach; uterus; trachea; connective tissue; blood; eye; bone; amniotic fluid; lymph; mixed; thyroid; vascular; pancreas; cervix; spleen; umbilical cord; pharynx; epididymis; muscle; ascites; adipose tissue; lymph node; pituitary gland; esophagus; salivary gland; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q21.3
UniSTS entry: Chr 3 DBEST27818 [Map Viewer]
UniSTS entry: Chr 3 HSC2JD062 [Map Viewer]
UniSTS entry: Chr 3 RH98834
UniSTS entry: Chr 3 D3S3816
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AK123939.1 Homo sapiens cDNA FLJ41945 fis, clone PLACE6019676, highly similar to Coatomer subunit gamma P
BC066650.1 Homo sapiens coatomer protein complex, subunit gamma, mRNA (cDNA clone MGC:70562 IMAGE:6046736), complete cds PA
AK001724.1 Homo sapiens cDNA FLJ10862 fis, clone NT2RP4001574, highly similar to Coatomer subunit gamma P
AF100756.1 Homo sapiens coat protein gamma-cop mRNA, complete cds PA
AK024721.1 Homo sapiens cDNA: FLJ21068 fis, clone CAS01519, highly similar to AF100756 Homo sapiens coat protein gamma-cop mRNA PA
AK025147.1 Homo sapiens cDNA: FLJ21494 fis, clone COL05566, highly similar to AF100756 Homo sapiens coat protein gamma-cop mRNA PA
AB047846.1 Homo sapiens mRNA for gamma1-COP, complete cds P
NM_016128.3 Homo sapiens coatomer protein complex, subunit gamma 1 (COPG1), mRNA PA
BC020498.1 Homo sapiens coatomer protein complex, subunit gamma, mRNA (cDNA clone IMAGE:3903594), partial cds PA
AK291693.1 Homo sapiens cDNA FLJ77708 complete cds, highly similar to Homo sapiens coatomer protein complex, subunit gamma (COPG), mRNA PA
AK309821.1 Homo sapiens cDNA, FLJ99862 PA

EST sequences (10 of 896) [Show all sequences]

AA991685.1 Clone IMAGE:1622018 embryonic tissue 3' read
AA992128.1 Clone IMAGE:1622066 embryonic tissue 3' read
AI049577.1 Clone IMAGE:1700546 kidney 3' read A
R19977.1 Clone IMAGE:34685 brain 5' read P
AI082780.1 Clone IMAGE:1662027 mixed 3' read A
AI126343.1 Clone IMAGE:1735989 testis 3' read A
CB047233.1 Clone IMAGE:3253326 kidney 3' read A
CB055185.1 Clone IMAGE:3291711 brain 5' read P
BX118121.1 Clone IMAGp998K17340_;_IMAGE:183304 mammary gland P
AI261979.1 Clone IMAGE:1871748 intestine 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help