> ADP-ribosylation-like factor 6 interacting protein 5 (ARL6IP5)
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UGID:908807     UniGene Hs.518060     Homo sapiens (human)   ARL6IP5 Links
ADP-ribosylation-like factor 6 interacting protein 5 (ARL6IP5)

Human protein-coding gene ARL6IP5. Represented by 1316 ESTs from 404 cDNA libraries. Corresponds to reference sequence NM_006407.3. [UniGene 908807 - Hs.518060]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_516574.2 PREDICTED: PRA1 family protein 3 isoform 3 P. troglodytes 100.0 187
NP_006398.1 ARL6IP5 gene product H. sapiens 100.0 187
NP_075368.1 Arl6ip5 gene product M. musculus 94.2 187
NP_001089756.1 ADP-ribosylation-like factor 6 interacting protein 5 X. laevis 75.5 187
NP_001006096.1 arl6ip5a gene product D. rerio 66.8 186
Other hits (2 of 23) [Show all]SpeciesId(%)Len(aa)
XP_001087809.1 PREDICTED: PRA1 family protein 3-like isoform 2 M. mulatta 99.5 187
XP_003894253.1 PREDICTED: PRA1 family protein 3 P. anubis 99.5 187

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; placenta; prostate; kidney; pharynx; testis; uncharacterized tissue; vascular; embryonic tissue; mixed; heart; eye; uterus; skin; pancreas; bone marrow; intestine; muscle; connective tissue; lymph node; stomach; mammary gland; spinal cord; bladder; blood; spleen; bone; adrenal gland; liver; adipose tissue; pituitary gland; thymus; trachea; ovary; parathyroid; nerve; tonsil; cervix; mouth; ear; ascites; lymph; ganglia; pineal gland; larynx; esophagus; umbilical cord; thyroid; epididymis; salivary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p14
UniSTS entry: Chr 3 SHGC-52890
UniSTS entry: Chr 3 SHGC-77077 [Map Viewer]
UniSTS entry: Chr 3 SHGC-33714 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AF070523.1 Homo sapiens JWA protein mRNA, complete cds P
AB014765.1 Homo sapiens mRNA for DERP11 (dermal papilla derived protein 11), complete cds P
AB097051.1 Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM27 PA
AF115965.1 Homo sapiens JM5 protein mRNA, complete cds P
NM_006407.3 Homo sapiens ADP-ribosylation-like factor 6 interacting protein 5 (ARL6IP5), mRNA P
AB052638.1 Homo sapiens hp22 mRNA for addicsin, complete cds PA
AF125530.1 Homo sapiens jmx protein mRNA, complete cds PA
AK223566.1 Homo sapiens mRNA for ADP-ribosylation-like factor 6 interacting protein 5 variant, clone: FCC128D11 P
BC005143.2 Homo sapiens ADP-ribosylation-like factor 6 interacting protein 5, mRNA (cDNA clone MGC:1917 IMAGE:3510436), complete cds PA
BC020797.1 Homo sapiens ADP-ribosylation-like factor 6 interacting protein 5, mRNA (cDNA clone MGC:23779 IMAGE:4134658), complete cds PA
AK312731.1 Homo sapiens cDNA, FLJ93137, Homo sapiens cytoskeleton related vitamin A responsive protein(JWA), mRNA P
AY102608.1 Homo sapiens ADP-ribosylation-like factor 6 interacting protein 5 (ARL6IP5) mRNA, complete cds P
AK301637.1 Homo sapiens cDNA FLJ51702 complete cds, moderately similar to PRA1 family protein 3 P
AK303148.1 Homo sapiens cDNA FLJ52128 complete cds, highly similar to PRA1 family protein 3 P
AK074612.1 Homo sapiens cDNA FLJ90131 fis, clone HEMBB1000447, highly similar to PRA1 family protein 3 P
AF161476.1 Homo sapiens HSPC127 mRNA, complete cds PA

EST sequences (10 of 1316) [Show all sequences]

AA977077.1 Clone IMAGE:1587172 uncharacterized tissue 3' read A
AA984037.1 Clone IMAGE:1585181 lung 3' read
AA904672.1 Clone IMAGE:1503982 mixed 3' read A
AA906154.1 Clone IMAGE:1504855 mixed 3' read A
AI025559.1 Clone IMAGE:1644287 testis 3' read A
AI031953.1 Clone IMAGE:1650709 parathyroid 3' read A
AI032001.1 Clone IMAGE:1650822 parathyroid 3' read A
AA928916.1 Clone IMAGE:1568303 lung 3' read
AI051167.1 Clone IMAGE:1669941 brain 3' read A
AI051780.1 Clone IMAGE:1659297 embryonic tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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