> TraB domain containing (TRABD)
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UGID:908478     UniGene Hs.517731     Homo sapiens (human)   TRABD Links
TraB domain containing (TRABD)

Human protein-coding gene TRABD. Represented by 366 ESTs from 148 cDNA libraries. Corresponds to reference sequence NM_025204.2. [UniGene 908478 - Hs.517731]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_079480.2 TRABD gene product H. sapiens 100.0 375
XP_003905785.1 PREDICTED: traB domain-containing protein P. anubis 99.7 375
NP_080761.2 traB domain-containing protein M. musculus 97.9 375
NP_001089270.1 TraB domain containing X. laevis 88.2 372
NP_997788.1 trabd gene product D. rerio 85.4 342
NP_650253.1 CG12360, isoform A D. melanogaster 52.9 308
NP_501005.2 Protein F38A5.2, isoform b C. elegans 50.7 284
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_515215.2 PREDICTED: traB domain-containing protein P. troglodytes 98.8 330
XP_001111850.1 PREDICTED: traB domain-containing protein-like isoform 4 M. mulatta 98.1 374

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; brain; lung; blood; bone marrow; eye; stomach; mixed; ovary; ascites; lymph node; thyroid; placenta; testis; muscle; heart; spleen; uterus; mammary gland; embryonic tissue; salivary gland; skin; adrenal gland; lymph; intestine; prostate; tonsil; pancreas; connective tissue; nerve; ganglia; bone; liver; kidney; cervix; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q13.33
UniSTS entry: Chr 22 RH78658
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AY203945.1 Homo sapiens LP6054 mRNA, complete cds PA
BC093029.1 Homo sapiens TraB domain containing, mRNA (cDNA clone MGC:110928 IMAGE:30527560), complete cds PA
AL449244.1 Novel human gene mapping to chomosome 22 P
AF218001.1 Homo sapiens clone PP2447 unknown mRNA PA
NM_025204.2 Homo sapiens TraB domain containing (TRABD), mRNA P
BC012445.1 Homo sapiens TraB domain containing, mRNA (cDNA clone MGC:9367 IMAGE:3857552), complete cds PA
AK292050.1 Homo sapiens cDNA FLJ77505 complete cds P
AK307115.1 Homo sapiens cDNA, FLJ97063

EST sequences (10 of 366) [Show all sequences]

AA996274.1 Clone IMAGE:1604067 lung 3' read A
AA897690.1 Clone IMAGE:1504603 mixed 3' read
AI127380.1 Clone IMAGE:1705469 heart 3' read A
AI160191.1 Clone IMAGE:1705210 heart 3' read A
BX108204.1 Clone IMAGp998J23793_;_IMAGE:346870 heart A
AI201980.1 Clone IMAGE:1944119 prostate 3' read A
AI202760.1 Clone IMAGE:1859431 brain 3' read A
AI342611.1 Clone IMAGE:1949391 uterus 3' read A
AI357020.1 Clone IMAGE:2002029 lymph node 3' read A
AI439834.1 Clone IMAGE:2140331 stomach 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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