> F11 receptor (F11R)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:908040     UniGene Hs.517293     Homo sapiens (human)   F11R Order cDNA clone, Links
F11 receptor (F11R)

Human protein-coding gene F11R. Represented by 836 ESTs from 283 cDNA libraries. Corresponds to reference sequence NM_016946.4. [UniGene 908040 - Hs.517293]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001172741.1 PREDICTED: junctional adhesion molecule A isoform 9 P. troglodytes 100.0 298
NP_058642.1 F11R gene product H. sapiens 100.0 298
NP_766235.1 F11r gene product M. musculus 74.3 299
NP_001004667.1 f11r gene product D. rerio 47.8 247
NP_001079659.1 similar to junctional adhesion molecule 1 precursor X. laevis 47.0 267
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
XP_001117664.1 PREDICTED: junctional adhesion molecule A isoform 2 M. mulatta 98.3 298
XP_003892990.1 PREDICTED: junctional adhesion molecule A P. anubis 98.3 298

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; intestine; embryonic tissue; mouth; lung; testis; uterus; prostate; trachea; mammary gland; pharynx; mixed; kidney; pancreas; salivary gland; ovary; skin; blood; brain; uncharacterized tissue; stomach; eye; thymus; liver; heart; vascular; esophagus; lymph; larynx; epididymis; cervix; adrenal gland; ascites; bladder; thyroid; connective tissue; lymph node; bone; spleen; bone marrow; parathyroid; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21.2-q21.3
UniSTS entry: Chr 1 A006O06
UniSTS entry: Chr 1 D1S3269 [Map Viewer]
UniSTS entry: Chr 1 RH18213 [Map Viewer]
UniSTS entry: Chr 1 G59842
UniSTS entry: Chr 1 D1S3328 [Map Viewer]
UniSTS entry: Chr 1 SGC34299 [Map Viewer]
UniSTS entry: Chr 1 F11R_1772
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 D10S275
UniSTS entry: Chr 1 D8S2279
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AY358896.1 Homo sapiens clone DNA40628 JAM (UNQ264) mRNA, complete cds PA
CR533512.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0919D for gene F11R, F11 receptor; complete cds, incl. stopcodon P
NM_016946.4 Homo sapiens F11 receptor (F11R), mRNA P
BT020103.1 Homo sapiens F11 receptor mRNA, complete cds P
AF154005.1 Homo sapiens junction adhesion molecule mRNA, complete cds P
AF172398.2 Homo sapiens junctional adhesion molecule-1 mRNA, complete cds PA
AF207907.1 Homo sapiens platelet F11 receptor mRNA, complete cds PA
AK026665.1 Homo sapiens cDNA: FLJ23012 fis, clone LNG00655, highly similar to AF172398 Homo sapiens platelet adhesion molecule PAM-1 mRNA PA
BC001533.2 Homo sapiens F11 receptor, mRNA (cDNA clone MGC:651 IMAGE:2990019), complete cds PA
AK075152.1 Homo sapiens cDNA FLJ90671 fis, clone PLACE1005544, highly similar to Junctional adhesion molecule 1 precursor P
AL365518.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 147447 A
AK304412.1 Homo sapiens cDNA FLJ59609 complete cds, highly similar to Junctional adhesion molecule A precursor P
AK299487.1 Homo sapiens cDNA FLJ54854 complete cds, highly similar to Junctional adhesion molecule A precursor P

EST sequences (10 of 836) [Show all sequences]

AA988666.1 Clone IMAGE:1593450 kidney 3' read A
AA902799.1 Clone IMAGE:1519131 uncharacterized tissue 3' read A
AI002582.1 Clone IMAGE:1610476 uncharacterized tissue 3' read
AI034414.1 Clone IMAGE:1647174 parathyroid 3' read A
AI075063.1 Clone IMAGE:1632354 mammary gland 3' read A
AI093487.1 Clone IMAGE:1696311 uterus 3' read
AI146725.1 Clone IMAGE:1707541 heart 3' read A
BX116635.1 Clone IMAGp998L0597_;_IMAGE:115348 mixed P
AI193265.1 Clone IMAGE:1743013 lung 3' read
AI217536.1 Clone IMAGE:1732216 heart 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help