> Transgelin 2 (TAGLN2)
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UGID:907915     UniGene Hs.517168     Homo sapiens (human)   TAGLN2 Order cDNA clone, Links
Transgelin 2 (TAGLN2)

Human protein-coding gene TAGLN2. Represented by 1628 ESTs from 382 cDNA libraries. Corresponds to reference sequence NM_003564.1. [UniGene 907915 - Hs.517168]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_002801871.1 PREDICTED: transgelin-2-like M. mulatta 100.0 198
XP_003892950.1 PREDICTED: transgelin-2 isoform 1 P. anubis 100.0 198
XP_524929.3 PREDICTED: transgelin-2 isoform 5 P. troglodytes 100.0 198
NP_003555.1 transgelin-2 isoform b H. sapiens 100.0 198
XP_852741.2 PREDICTED: transgelin-2 C. lupus familiaris 100.0 198
XP_003125720.2 PREDICTED: transgelin-2-like isoform 1 S. scrofa 100.0 198
NP_001013145.1 Tagln2 gene product R. norvegicus 99.5 198
NP_001013617.1 TAGLN2 gene product B. taurus 99.5 198
XP_004002705.1 PREDICTED: transgelin-2 isoform 1 O. aries 99.5 198
NP_848713.1 transgelin-2 M. musculus 99.0 198
NP_001080783.1 transgelin 2 X. laevis 77.7 196
NP_963870.1 tagln2 gene product D. rerio 73.1 200
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_001504458.1 PREDICTED: transgelin-2-like E. caballus 97.5 198
XP_001369787.1 PREDICTED: transgelin-2-like M. domestica 96.0 198

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; skin; lung; uterus; brain; uncharacterized tissue; adipose tissue; pancreas; mammary gland; embryonic tissue; prostate; intestine; mixed; lymph; ovary; eye; blood; kidney; cervix; testis; connective tissue; spleen; bone; liver; stomach; tonsil; muscle; lymph node; adrenal gland; bone marrow; larynx; amniotic fluid; epididymis; salivary gland; heart; pharynx; thyroid; bladder; ascites; nerve; esophagus; thymus; pituitary gland; vascular; ganglia; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21-q25
UniSTS entry: Chr 1 Tagln2
UniSTS entry: Chr 1 RH68257
UniSTS entry: Chr 1 RH25344
UniSTS entry: Chr 1 RH68227
UniSTS entry: Chr 1 D8S1914
UniSTS entry: Chr 14 D14S774
UniSTS entry: Chr 15 Rnu2
UniSTS entry: Chr 18 A002P09 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

NM_003564.1 Homo sapiens transgelin 2 (TAGLN2), mRNA P
CR542136.1 Homo sapiens full open reading frame cDNA clone RZPDo834E0123D for gene TAGLN2, transgelin 2; complete cds, without stopcodon P
CR542126.1 Homo sapiens full open reading frame cDNA clone RZPDo834B0923D for gene TAGLN2, transgelin 2; complete cds, incl. stopcodon P
AJ844624.2 Homo sapiens mRNA for transgelin 2 (TAGLN2 gene), 3'UTR
AJ844623.2 Homo sapiens partial mRNA for transgelin 2 (TAGLN2 gene)
AY007127.1 Homo sapiens clone CDABP0035 mRNA sequence PA
BC002616.1 Homo sapiens transgelin 2, mRNA (cDNA clone MGC:2989 IMAGE:3143116), complete cds PA
BC009357.2 Homo sapiens transgelin 2, mRNA (cDNA clone MGC:15279 IMAGE:4301018), complete cds PA
AK291562.1 Homo sapiens cDNA FLJ76411 complete cds, highly similar to Homo sapiens transgelin 2 (TAGLN2), mRNA P
AK298654.1 Homo sapiens cDNA FLJ57759 complete cds, moderately similar to Transgelin-2
GU727636.1 Homo sapiens epididymis tissue sperm binding protein Li 7e mRNA, complete cds PA
D21261.1 Homo sapiens KIAA0120 mRNA, partial cds P

EST sequences (10 of 1628) [Show all sequences]

R15716.1 Clone IMAGE:66425 mixed 5' read
AI025021.1 Clone IMAGE:1631727 mammary gland 3' read A
AI028180.1 Clone IMAGE:1644569 testis 3' read A
AI040268.1 Clone IMAGE:1663785 skin 3' read
AI057137.1 Clone IMAGE:1669992 brain 3' read A
AI075437.1 Clone IMAGE:1681861 skin 3' read A
AI080589.1 Clone IMAGE:1680429 skin 3' read A
AI081997.1 Clone IMAGE:1638009 mammary gland 3' read A
AI127422.1 Clone IMAGE:1705918 heart 3' read A
AI160696.1 Clone IMAGE:1715952 placenta 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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