> N-terminal EF-hand calcium binding protein 3 (NECAB3)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:907733     UniGene Hs.516986     Homo sapiens (human)   NECAB3 Order cDNA clone, Links
N-terminal EF-hand calcium binding protein 3 (NECAB3)

Human protein-coding gene NECAB3. Represented by 251 ESTs from 140 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 907733 - Hs.516986]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_112509.3 NECAB3 gene product H. sapiens 100.0 395
NP_067521.2 N-terminal EF-hand calcium-binding protein 3 M. musculus 89.5 352
NP_001017848.1 necab1 gene product D. rerio 57.4 325
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_514587.3 PREDICTED: n-terminal EF-hand calcium-binding protein 3 P. troglodytes 98.1 365
XP_003904892.1 PREDICTED: N-terminal EF-hand calcium-binding protein 3 P. anubis 95.4 367

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; testis; eye; lung; mammary gland; skin; mixed; ovary; cervix; intestine; pancreas; placenta; prostate; uterus; kidney; muscle; trachea; blood; mouth; ascites; lymph; pituitary gland; stomach; spleen; nerve; bone; embryonic tissue; thymus; connective tissue; heart; salivary gland; bone marrow; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20q11.22
UniSTS entry: Chr 20 RH12699 [Map Viewer]
UniSTS entry: Chr 20 A006D04 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC047673.1 Homo sapiens N-terminal EF-hand calcium binding protein 3, mRNA (cDNA clone MGC:51791 IMAGE:5755231), complete cds PA
AK124388.1 Homo sapiens cDNA FLJ42397 fis, clone ASTRO2001480, highly similar to Homo sapiens neuronal calcium binding protein NECAB3 mRNA P
AB039947.1 Homo sapiens XB51 mRNA for X11L-binding protein 51, complete cds PA
AF193759.1 Homo sapiens neuronal calcium binding protein NECAB3 mRNA, complete cds PA
NM_031232.3 Homo sapiens N-terminal EF-hand calcium binding protein 3 (NECAB3), transcript variant 2, mRNA PA
NM_031231.3 Homo sapiens N-terminal EF-hand calcium binding protein 3 (NECAB3), transcript variant 1, mRNA PA
AF409141.1 Homo sapiens NIP1 mRNA, complete cds PA
AK291895.1 Homo sapiens cDNA FLJ76673 complete cds, highly similar to Homo sapiens amyloid beta (A4) precursor protein-binding, family A, member 2 binding protein, transcript variant 1, mRNA P
BC023270.1 Homo sapiens N-terminal EF-hand calcium binding protein 3, mRNA (cDNA clone IMAGE:3900583), with apparent retained intron PA

EST sequences (10 of 251) [Show all sequences]

AA978110.1 Clone IMAGE:1578532 mixed 3' read A
R15375.1 Clone IMAGE:29591 brain 5' read
R17389.1 Clone IMAGE:31066 brain 5' read P
AA927875.1 Clone IMAGE:1541367 mixed 3' read A
AI016851.1 Clone IMAGE:1627467 mixed 3' read A
AI147260.1 Clone IMAGE:1702642 brain 3' read A
BX090970.1 Clone IMAGp998O06177_;_IMAGE:42947 brain P
AI274924.1 Clone IMAGE:1875658 intestine 3' read A
CB127745.1 Clone C1SNU17-6-F08 cervix 5' read
CB130408.1 Clone L12JSHC0-7-F06 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help