> TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa (TAF10)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:131635     UniGene Hs.5158     Homo sapiens (human)   TAF10 Order cDNA clone, Links
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa (TAF10)

Human protein-coding gene TAF10. Represented by 319 ESTs from 182 cDNA libraries. Corresponds to reference sequence NM_006284.3. [UniGene 131635 - Hs.5158]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_006275.1 TAF10 gene product H. sapiens 100.0 217
XP_001109210.1 PREDICTED: transcription initiation factor TFIID subunit 10-like isoform 2 M. mulatta 99.5 217
XP_003910333.1 PREDICTED: transcription initiation factor TFIID subunit 10 P. anubis 99.5 217
NP_064408.2 Taf10 gene product M. musculus 97.2 217
NP_001090514.1 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa X. laevis 91.8 195
NP_001038276.1 taf10 gene product D. rerio 89.7 174
NP_525001.2 integrin linked kinase, isoform A D. melanogaster 66.3 163
NP_497139.1 Protein PAT-4 C. elegans 63.1 157
Other hits (2 of 36) [Show all]SpeciesId(%)Len(aa)
XP_004016667.1 PREDICTED: transcription initiation factor TFIID subunit 10 O. aries 99.3 152
XP_542454.2 PREDICTED: transcription initiation factor TFIID subunit 10 isoform 1 C. lupus familiaris 99.1 217

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; kidney; uncharacterized tissue; intestine; prostate; thymus; mammary gland; eye; mixed; placenta; uterus; cervix; pancreas; ovary; lung; thyroid; trachea; liver; muscle; vascular; salivary gland; spleen; skin; blood; embryonic tissue; bone; adrenal gland; heart; ascites; stomach; connective tissue; larynx; esophagus; lymph; bone marrow; umbilical cord; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p15.3
UniSTS entry: Chr 11 PMC99905P1
UniSTS entry: Chr 11 A002C40
UniSTS entry: Chr 11 WI-22555 [Map Viewer]
UniSTS entry: Chr 11 RH12375 [Map Viewer]
UniSTS entry: Chr 11 RH70892
UniSTS entry: Chr 11 PMC99905P2
UniSTS entry: Chr 11 ILK_2854
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_006284.3 Homo sapiens TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa (TAF10), mRNA PA
CR541943.1 Homo sapiens full open reading frame cDNA clone RZPDo834C0934D for gene TAF10, TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa; complete cds, incl. stopcodon P
U13991.1 Human TATA-binding protein associated factor 30 kDa subunit (tafII30) mRNA, complete cds P
BC012088.1 Homo sapiens TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa, mRNA (cDNA clone MGC:20029 IMAGE:4562773), complete cds PA
AK310989.1 Homo sapiens cDNA, FLJ18031
AL833496.1 Homo sapiens mRNA; cDNA DKFZp686M1629 (from clone DKFZp686M1629) PA

EST sequences (10 of 319) [Show all sequences]

AA954803.1 Clone IMAGE:1574295 kidney 3' read P
AA962046.1 Clone IMAGE:1592309 kidney 3' read
AA975745.1 Clone IMAGE:1591115 kidney 3' read
R14896.1 Clone IMAGE:30000 brain 5' read
R17286.1 Clone IMAGE:31833 brain 5' read
AA907455.1 Clone IMAGE:1522325 lung 3' read
BX107902.1 Clone IMAGp998K131775_;_IMAGE:723972 ovary P
BX109502.1 Clone IMAGp998H17114_;_IMAGE:121792 mixed
AI189117.1 Clone IMAGE:1722283 uterus 3' read PA
AI282814.1 Clone IMAGE:1960195 esophagus 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help