> S100 calcium binding protein A1 (S100A1)
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UGID:906462     UniGene Hs.515715     Homo sapiens (human)   S100A1 Order cDNA clone, Links
S100 calcium binding protein A1 (S100A1)

Human protein-coding gene S100A1. Represented by 190 ESTs from 64 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_006271.1. [UniGene 906462 - Hs.515715]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003892731.1 PREDICTED: protein S100-A1 P. anubis 100.0 93
NP_006262.1 S100A1 gene product H. sapiens 100.0 93
NP_035439.1 S100a1 gene product M. musculus 93.6 93
Other hits (2 of 11) [Show all]SpeciesId(%)Len(aa)
XP_513820.2 PREDICTED: protein S100-A1 isoform 2 P. troglodytes 99.3 146
XP_001494920.1 PREDICTED: protein S100-A1-like E. caballus 98.9 93

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; heart; muscle; skin; eye; mammary gland; lung; thyroid; mixed; placenta; uncharacterized tissue; connective tissue; bone; ovary; kidney; embryonic tissue; prostate; larynx; testis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21
UniSTS entry: Chr 1 S100A1
UniSTS entry: Chr 1 STS-X58079 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BT006938.1 Homo sapiens S100 calcium binding protein A1 mRNA, complete cds P
NM_006271.1 Homo sapiens S100 calcium binding protein A1 (S100A1), mRNA PA
BC072006.1 Homo sapiens S100 calcium binding protein A1, mRNA (cDNA clone IMAGE:4861318) A
BC094843.1 Homo sapiens S100 calcium binding protein A1, mRNA (cDNA clone IMAGE:4544435) A
BC014392.1 Homo sapiens S100 calcium binding protein A1, mRNA (cDNA clone MGC:1324 IMAGE:3543900), complete cds PA
AK312152.1 Homo sapiens cDNA, FLJ92437, Homo sapiens S100 calcium binding protein A1 (S100A1), mRNA P
AB451446.1 Homo sapiens S100A1 mRNA for S100 calcium binding protein A1, partial cds, clone: FLJ08182AAAF P
AB451316.1 Homo sapiens S100A1 mRNA for S100 calcium binding protein A1, complete cds, clone: FLJ08182AAAN P
X58079.1 Human mRNA for S100 alpha protein PA

EST sequences (10 of 190) [Show all sequences]

AA999856.1 Clone IMAGE:1636378 kidney 3' read PA
BX096164.1 Clone IMAGp998J07329_;_IMAGE:179046 brain PA
CB117593.1 Clone B1T694954-6-H01 brain 5' read P
R48777.1 Clone IMAGE:153992 mammary gland 3' read A
R48882.1 Clone IMAGE:153992 mammary gland 5' read
F24726.1 Clone s4000018D04 muscle
F24806.1 Clone s4000020D01 muscle
F27884.1 Clone s4000025C04 muscle P
F31222.1 Clone s4000111A04 muscle P
F32516.1 Clone s3000038A02 muscle P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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