> Trans-2,3-enoyl-CoA reductase (TECR)
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UGID:906389     UniGene Hs.515642     Homo sapiens (human)   TECR Order cDNA clone, Links
Trans-2,3-enoyl-CoA reductase (TECR)

Human protein-coding gene TECR. Represented by 598 ESTs from 252 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 906389 - Hs.515642]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_612510.1 TECR gene product H. sapiens 100.0 307
XP_004009291.1 PREDICTED: trans-2,3-enoyl-CoA reductase O. aries 100.0 186
XP_512444.3 PREDICTED: trans-2,3-enoyl-CoA reductase P. troglodytes 100.0 152
XP_003915100.1 PREDICTED: trans-2,3-enoyl-CoA reductase P. anubis 99.7 318
NP_001231519.1 trans-2,3-enoyl-CoA reductase M. mulatta 99.7 307
XP_852850.1 PREDICTED: trans-2,3-enoyl-CoA reductase isoform 2 C. lupus familiaris 99.7 307
XP_001498421.1 PREDICTED: trans-2,3-enoyl-CoA reductase E. caballus 99.7 307
NP_598879.1 Tecr gene product M. musculus 98.0 307
NP_001085733.1 trans-2,3-enoyl-CoA reductase X. laevis 92.9 307
NP_958456.1 tecrb gene product D. rerio 89.3 307
NP_647836.2 Sc2 D. melanogaster 60.8 300
NP_495430.1 Protein ART-1 C. elegans 60.5 303
XP_001699001.1 hypothetical protein CHLREDRAFT_602 C. reinhardtii 48.0 202
NP_191096.1 enoyl reductase A. thaliana 46.9 211
Other hits (2 of 44) [Show all]SpeciesId(%)Len(aa)
NP_001029920.1 TECR gene product B. taurus 99.3 307
XP_003123420.3 PREDICTED: trans-2,3-enoyl-CoA reductase-like S. scrofa 98.9 280

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; skin; uncharacterized tissue; bladder; eye; testis; embryonic tissue; connective tissue; mouth; thyroid; adrenal gland; intestine; ovary; thymus; spleen; vascular; prostate; mammary gland; heart; lung; mixed; blood; muscle; esophagus; cervix; pancreas; stomach; liver; ascites; parathyroid; kidney; lymph; spinal cord; uterus; pharynx; bone; lymph node; adipose tissue; bone marrow; pituitary gland; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.12
UniSTS entry: Chr 4 RH70771
UniSTS entry: Chr 19 Gpsn2
UniSTS entry: Chr 1 D11S2560
UniSTS entry: Chr 19 RH92817
UniSTS entry: Chr 1 D10S275
UniSTS entry: Chr 1 D1S1423
UniSTS entry: Chr 1 D8S2279
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

BT007179.1 Homo sapiens glycoprotein, synaptic 2 mRNA, complete cds P
AK001416.1 Homo sapiens cDNA FLJ10554 fis, clone NT2RP2002385, highly similar to Synaptic glycoprotein SC2 P
CR456892.1 Homo sapiens full open reading frame cDNA clone RZPDo834D1211D for gene GPSN2, glycoprotein, synaptic 2; complete cds, incl. stopcodon P
AF222742.1 Homo sapiens synaptic glycoprotein SC2 (SC2) mRNA, complete cds PA
BC002425.1 Homo sapiens glycoprotein, synaptic 2, mRNA (cDNA clone MGC:1968 IMAGE:3163592), complete cds PA
BC000174.2 Homo sapiens, clone IMAGE:2901253, mRNA, partial cds PA
BC005952.1 Homo sapiens glycoprotein, synaptic 2, mRNA (cDNA clone MGC:14589 IMAGE:4249841), complete cds PA
BC007801.2 Homo sapiens glycoprotein, synaptic 2, mRNA (cDNA clone MGC:14250 IMAGE:4128702), complete cds PA
BC013881.2 Homo sapiens glycoprotein, synaptic 2, mRNA (cDNA clone MGC:10603 IMAGE:3928698), complete cds PA
AK315412.1 Homo sapiens cDNA, FLJ96461, Homo sapiens glycoprotein, synaptic 2 (GPSN2), mRNA P
AK094087.1 Homo sapiens cDNA FLJ36768 fis, clone ADIPS1000064, highly similar to Synaptic glycoprotein SC2 P
AK299134.1 Homo sapiens cDNA FLJ58248 complete cds, highly similar to Synaptic glycoprotein SC2 PA
BC034484.1 Homo sapiens glycoprotein, synaptic 2, mRNA (cDNA clone IMAGE:4823258) A
BC005384.1 Homo sapiens glycoprotein, synaptic 2, mRNA (cDNA clone IMAGE:3935809), partial cds PA
AF038959.1 Homo sapiens synaptic glycoprotein SC2 mRNA, complete cds PA
AF038958.1 Homo sapiens synaptic glycoprotein SC2 spliced variant mRNA, complete cds PA
NR_038104.1 Homo sapiens trans-2,3-enoyl-CoA reductase (TECR), transcript variant 3, non-coding RNA PA
NR_038103.1 Homo sapiens trans-2,3-enoyl-CoA reductase (TECR), transcript variant 2, non-coding RNA PA
NM_138501.5 Homo sapiens trans-2,3-enoyl-CoA reductase (TECR), transcript variant 1, mRNA PA

EST sequences (10 of 598) [Show all sequences]

AI139866.1 Clone IMAGE:1737449 testis 3' read A
CB163292.1 Clone L17N670205n1-26-A11 liver 5' read P
CB111584.1 Clone L5HLK1-20-C06 liver 5' read P
CB124092.1 Clone L5HLK1s1-5-D02 liver 5' read P
CB121784.1 Clone L11SNU354-2-F07 liver 5' read P
CB128249.1 Clone L11SNU354-14-G11 liver 5' read P
CB129568.1 Clone L11SNU354-12-C06 liver 5' read P
CB132229.1 Clone L11SNU354s1-1-A11 liver 5' read P
CB141809.1 Clone L11SNU354s1-24-D02 liver 5' read P
CB142220.1 Clone L11SNU354s1-19-G02 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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