> GATA binding protein 6 (GATA6)
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UGID:905493     UniGene Hs.514746     Homo sapiens (human)   GATA6 Links
GATA binding protein 6 (GATA6)

Human protein-coding gene GATA6. Represented by 106 ESTs from 47 cDNA libraries. Corresponds to reference sequence NM_005257.4. [UniGene 905493 - Hs.514746]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_005248.2 GATA6 gene product H. sapiens 100.0 594
NP_034388.2 Gata6 gene product M. musculus 91.2 588
NP_001081452.1 GATA-binding factor 6-A X. laevis 68.5 484
NP_571632.1 gata6 gene product D. rerio 68.4 382
NP_732102.1 pannier, isoform B D. melanogaster 64.5 220
NP_001033436.1 Protein ELT-1, isoform b C. elegans 58.3 216
Other hits (2 of 39) [Show all]SpeciesId(%)Len(aa)
XP_003914278.1 PREDICTED: transcription factor GATA-6 P. anubis 99.3 594
XP_002800933.1 PREDICTED: transcription factor GATA-6-like M. mulatta 99.1 652

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: connective tissue; vascular; testis; lung; uncharacterized tissue; embryonic tissue; intestine; mixed; ovary; spleen; liver; skin; stomach; cervix; heart; adrenal gland; pancreas; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18q11.1-q11.2
UniSTS entry: Chr 18 RH91359
UniSTS entry: Chr 18 RH79922
UniSTS entry: Chr 18 GATA6_V53
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_005257.4 Homo sapiens GATA binding protein 6 (GATA6), mRNA P
AK223547.1 Homo sapiens mRNA for GATA binding protein 6 variant, clone: FCC126D11 P
U66075.1 Human transcription factor hGATA-6 mRNA, complete cds PA
X95701.1 H.sapiens mRNA for GATA-6 DNA-binding protein P
D87811.1 Homo sapiens mRNA for GATA-6, complete cds P

EST sequences (10 of 106) [Show all sequences]

AA902908.1 Clone IMAGE:1516685 uncharacterized tissue 3' read
AI122998.1 Clone IMAGE:1509883 mixed 3' read A
AI183672.1 Clone IMAGE:1739018 lung 3' read P
AI193482.1 Clone IMAGE:1743283 lung 3' read P
AI221779.1 Clone IMAGE:1843288 mixed 3' read P
AA723694.1 Clone IMAGE:1325859 mixed 3' read
AI394107.1 Clone IMAGE:2109455 uncharacterized tissue 3' read
AI354319.1 Clone IMAGE:1952451 lung 3' read
AI475969.1 Clone IMAGE:2154889 intestine 3' read A
AI610870.1 Clone IMAGE:2188456 stomach 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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