> ATPase, Ca++ transporting, ubiquitous (ATP2A3)
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UGID:904617     UniGene Hs.513870     Homo sapiens (human)   ATP2A3 Order cDNA clone, Links
ATPase, Ca++ transporting, ubiquitous (ATP2A3)

Human protein-coding gene ATP2A3. Represented by 369 ESTs from 111 cDNA libraries. Corresponds to 7 reference sequences (different isoforms). [UniGene 904617 - Hs.513870]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_777613.1 ATP2A3 gene product H. sapiens 100.0 1051
NP_058025.2 Atp2a3 gene product M. musculus 97.3 1037
NP_001088563.1 ATPase, Ca++ transporting, ubiquitous X. laevis 87.2 1031
XP_697108.5 PREDICTED: sarcoplasmic/endoplasmic reticulum calcium ATPase 3 D. rerio 85.5 994
NP_476832.1 calcium ATPase at 60A, isoform A D. melanogaster 78.6 989
NP_499385.3 Protein SCA-1, isoform b C. elegans 77.6 996
NP_563860.1 Ca2+-transporting ATPase A. thaliana 65.0 976
XP_964482.2 calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type N. crassa 64.7 977
XP_001700727.1 calcium-transporting ATPase, endoplasmic reticulum-type C. reinhardtii 61.1 1035
Other hits (2 of 64) [Show all]SpeciesId(%)Len(aa)
XP_003912167.1 PREDICTED: sarcoplasmic/endoplasmic reticulum calcium ATPase 3 P. anubis 98.7 998
XP_002800297.1 PREDICTED: sarcoplasmic/endoplasmic reticulum calcium ATPase 3 M. mulatta 98.7 1041

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lymph node; pancreas; uncharacterized tissue; blood; intestine; mixed; bone marrow; thymus; kidney; lung; testis; thyroid; cervix; brain; embryonic tissue; liver; spleen; tonsil; eye; uterus; mammary gland; skin; ovary; lymph; connective tissue; muscle; ganglia; vascular; salivary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17p13.3
UniSTS entry: Chr 17 RH12619
UniSTS entry: Chr 17 G42991
UniSTS entry: Chr 17 D17S1575
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AF068220.1 Homo sapiens sarco-/endoplasmic reticulum Ca-ATPase 3 (ATP2A3) mRNA, alternatively spliced, complete cds P
AF068221.1 Homo sapiens sarco-/endoplasmic reticulum Ca-ATPase 3 (ATP2A3) mRNA, alternatively spliced, partial cds P
NM_174958.2 Homo sapiens ATPase, Ca++ transporting, ubiquitous (ATP2A3), transcript variant 7, mRNA PA
NM_174957.2 Homo sapiens ATPase, Ca++ transporting, ubiquitous (ATP2A3), transcript variant 6, mRNA PA
NM_174956.2 Homo sapiens ATPase, Ca++ transporting, ubiquitous (ATP2A3), transcript variant 3, mRNA PA
NM_174955.2 Homo sapiens ATPase, Ca++ transporting, ubiquitous (ATP2A3), transcript variant 2, mRNA PA
NM_174954.2 Homo sapiens ATPase, Ca++ transporting, ubiquitous (ATP2A3), transcript variant 4, mRNA PA
NM_174953.2 Homo sapiens ATPase, Ca++ transporting, ubiquitous (ATP2A3), transcript variant 5, mRNA PA
NM_005173.3 Homo sapiens ATPase, Ca++ transporting, ubiquitous (ATP2A3), transcript variant 1, mRNA PA
AY460339.1 Homo sapiens sarco/endoplasmic reticulum Ca2+ ATPase isoform 3f (ATP2A3) mRNA, partial cds, alternatively spliced P
AK292716.1 Homo sapiens cDNA FLJ77199 complete cds, highly similar to Homo sapiens ATPase, Ca++ transporting, ubiquitous (ATP2A3), transcript variant 6, mRNA P
AF458229.1 Homo sapiens sarco/endoplasmic reticulum Ca2+ ATPase isoform 3e (ATP2A3) mRNA, partial cds P
AF458228.1 Homo sapiens sarco/endoplasmic reticulum Ca2+ ATPase isoform 3d (ATP2A3) mRNA, partial cds P
Z69881.1 H.sapiens mRNA for adenosine triphosphatase, calcium P
S68239.1 SERCA3=sarco/endoplasmic reticulum Ca(2+)-ATPase 3-type Ca2+ pump [human, lymphoblastoid Jurkat cells, mRNA Partial, 169 nt]
BC035729.1 Homo sapiens ATPase, Ca++ transporting, ubiquitous, mRNA (cDNA clone MGC:46161 IMAGE:5723849), complete cds P

EST sequences (10 of 369) [Show all sequences]

CB047171.1 Clone IMAGE:3253180 kidney 3' read
CB047172.1 Clone IMAGE:3253180 kidney 5' read A
CB068451.1 Clone IMAGE:6365428 pancreas 3' read
CB068789.1 Clone IMAGE:6554239 pancreas 3' read
BX100307.1 Clone IMAGp998O08331_;_IMAGE:179935 brain P
AI263429.1 Clone IMAGE:1855726 mixed 3' read
CB177361.1 Clone IMAGE:6365428 pancreas 5' read P
AI285329.1 Clone IMAGE:1874632 intestine 3' read
AI337377.1 Clone IMAGE:2062463 intestine 3' read
AI338056.1 Clone IMAGE:1950464 lung 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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