> Transforming growth factor beta 1 induced transcript 1 (TGFB1I1)
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UGID:904277     UniGene Hs.513530     Homo sapiens (human)   TGFB1I1 Order cDNA clone, Links
Transforming growth factor beta 1 induced transcript 1 (TGFB1I1)

Human protein-coding gene TGFB1I1. Represented by 401 ESTs from 147 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 904277 - Hs.513530]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001113103.1 PREDICTED: transforming growth factor beta-1-induced transcript 1 protein-like isoform 4 M. mulatta 100.0 460
XP_001159480.1 PREDICTED: transforming growth factor beta-1-induced transcript 1 protein isoform 2 P. troglodytes 100.0 460
NP_001035919.1 TGFB1I1 gene product H. sapiens 100.0 460
XP_003916855.1 PREDICTED: transforming growth factor beta-1-induced transcript 1 protein isoform 1 P. anubis 99.8 460
NP_033391.1 Tgfb1i1 gene product M. musculus 95.3 443
NP_724185.1 paxillin, isoform B D. melanogaster 59.6 368
NP_963882.1 pxn gene product D. rerio 57.5 475
NP_001089149.2 Hic-5 X. laevis 55.7 505
NP_001122677.1 Protein PXL-1, isoform c C. elegans 54.2 285
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_002721772.1 PREDICTED: transforming growth factor beta 1 induced transcript 1 O. cuniculus 98.5 461
NP_001030390.1 TGFB1I1 gene product B. taurus 97.5 438

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uterus; brain; placenta; mixed; intestine; embryonic tissue; ovary; muscle; eye; thyroid; lung; testis; umbilical cord; uncharacterized tissue; mouth; adipose tissue; esophagus; adrenal gland; stomach; prostate; skin; connective tissue; kidney; cervix; spleen; bone; mammary gland; vascular; liver; pancreas; heart; thymus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p11.2
UniSTS entry: Chr 16 RH104172
UniSTS entry: Chr 15 Tjp1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AK122975.1 Homo sapiens cDNA FLJ16722 fis, clone UTERU3002620, highly similar to Homo sapiens transforming growth factor beta 1 induced transcript 1 (TGFB1I1) P
NM_015927.4 Homo sapiens transforming growth factor beta 1 induced transcript 1 (TGFB1I1), transcript variant 2, mRNA P
AF116343.1 Homo sapiens androgen receptor coactivator ARA55 mRNA, complete cds P
BC001830.2 Homo sapiens transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:4078 IMAGE:3030477), complete cds PA
NM_001042454.2 Homo sapiens transforming growth factor beta 1 induced transcript 1 (TGFB1I1), transcript variant 1, mRNA P
BC001507.3 Homo sapiens transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:2432 IMAGE:3030477), complete cds PA
BC017288.2 Homo sapiens transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:29660 IMAGE:4901903), complete cds PA
AK313327.1 Homo sapiens cDNA, FLJ93847, Homo sapiens transforming growth factor beta 1 induced transcript 1 (TGFB1I1), mRNA P
BC032545.1 Homo sapiens transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:45093 IMAGE:5535913), complete cds PA
NM_001164719.1 Homo sapiens transforming growth factor beta 1 induced transcript 1 (TGFB1I1), transcript variant 3, mRNA P
AB007836.1 Homo sapiens mRNA for Hic-5, partial cds P

EST sequences (10 of 401) [Show all sequences]

AA992124.1 Clone IMAGE:1622059 embryonic tissue 3' read
AA992556.1 Clone IMAGE:1623909 embryonic tissue 3' read
AI039390.1 Clone IMAGE:1658785 embryonic tissue 3' read
AI081940.1 Clone IMAGE:1681773 skin 3' read
AI095303.1 Clone IMAGE:1666393 skin 3' read
AI146635.1 Clone IMAGE:1679963 skin 3' read A
CB053248.1 Clone IMAGE:3290828 uncharacterized tissue 5' read P
BX097145.1 Clone IMAGp998P06239_;_IMAGE:153461 mammary gland P
AI216320.1 Clone IMAGE:1841130 mixed 3' read
AI264751.1 Clone IMAGE:2005302 pancreas 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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