> Ataxin 7-like 3 (ATXN7L3)
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UGID:903398     UniGene Hs.512651     Homo sapiens (human)   ATXN7L3 Order cDNA clone, Links
Ataxin 7-like 3 (ATXN7L3)

Human protein-coding gene ATXN7L3. Represented by 323 ESTs from 166 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 903398 - Hs.512651]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_064603.1 ATXN7L3 gene product H. sapiens 100.0 353
XP_003362591.1 PREDICTED: ataxin-7-like protein 3 isoform 2 E. caballus 100.0 353
NP_001179537.1 ataxin-7-like protein 3 B. taurus 100.0 346
XP_001114294.1 PREDICTED: ataxin-7-like protein 3-like isoform 2 M. mulatta 99.8 405
XP_003913208.1 PREDICTED: ataxin-7-like protein 3 isoform 2 P. anubis 99.8 405
NP_001092306.1 Atxn7l3 gene product M. musculus 99.7 353
XP_002719482.1 PREDICTED: ataxin 7-like 3 isoform 2 O. cuniculus 99.7 353
NP_001035431.2 atxn7l3 gene product D. rerio 86.1 366
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_213493.5 PREDICTED: ataxin 7-like 3 isoform 2 R. norvegicus 99.2 353
XP_003483021.1 PREDICTED: ataxin-7-like protein 3 isoform 2 S. scrofa 99.2 353

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; skin; testis; embryonic tissue; intestine; mouth; lung; larynx; lymph node; tonsil; spleen; adrenal gland; thymus; eye; connective tissue; uterus; placenta; prostate; blood; heart; bone marrow; mammary gland; lymph; kidney; ovary; pancreas; thyroid; mixed; epididymis; muscle; ascites; bone; umbilical cord; adipose tissue; ganglia; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q21.31
UniSTS entry: Chr 17 MARC_7251-7252:996687693:1
UniSTS entry: Chr X MARC_8253-8254:996688461:1
UniSTS entry: Chr 17 MARC_26625-26626:1034086788:1
UniSTS entry: Chr 17 RH16013 [Map Viewer]
UniSTS entry: Chr 17 G20416
UniSTS entry: Chr 17 A005Q19 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AK126117.1 Homo sapiens cDNA FLJ44129 fis, clone THYMU2007179 P
BC064932.1 Homo sapiens cDNA clone IMAGE:6148886, partial cds A
AL390158.1 Homo sapiens mRNA; cDNA DKFZp761G2113 (from clone DKFZp761G2113) PA
BC100295.1 Homo sapiens cDNA clone IMAGE:6205293 A
BC113595.1 Homo sapiens ataxin 7-like 3, mRNA (cDNA clone MGC:142155 IMAGE:8322647), complete cds P
BC126113.1 Homo sapiens ataxin 7-like 3, mRNA (cDNA clone MGC:161391 IMAGE:8991829), complete cds P
NM_020218.1 Homo sapiens ataxin 7-like 3 (ATXN7L3), transcript variant 1, mRNA PA
NM_001098833.1 Homo sapiens ataxin 7-like 3 (ATXN7L3), transcript variant 2, mRNA PA
AK056002.1 Homo sapiens cDNA FLJ31440 fis, clone NT2NE2000763 P
BC024695.2 Homo sapiens ataxin 7-like 3, mRNA (cDNA clone IMAGE:4478232) PA
AK074344.1 Homo sapiens cDNA FLJ23764 fis, clone HEP19160 A
AK296689.1 Homo sapiens cDNA FLJ57386 complete cds P
BC037418.1 Homo sapiens ataxin 7-like 3, mRNA (cDNA clone IMAGE:5499446), partial cds PA

EST sequences (10 of 323) [Show all sequences]

AA970399.1 Clone IMAGE:1573048 kidney 3' read A
AA911093.1 Clone IMAGE:1519050 uncharacterized tissue 3' read A
AI074000.1 Clone IMAGE:1670805 uncharacterized tissue 3' read A
AI090441.1 Clone IMAGE:1672367 uncharacterized tissue 3' read PA
AI140135.1 Clone IMAGE:1693762 heart 3' read A
AI143946.1 Clone IMAGE:1737688 testis 3' read A
AI085989.1 Clone IMAGE:1679611 skin 3' read A
AI187044.1 Clone IMAGE:1741611 lung 3' read A
AI192140.1 Clone IMAGE:1721653 uterus 3' read A
AI192515.1 Clone IMAGE:1743453 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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