> Non imprinted in Prader-Willi/Angelman syndrome 1 (NIPA1)
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UGID:902544     UniGene Hs.511797     Homo sapiens (human)   NIPA1 Links
Non imprinted in Prader-Willi/Angelman syndrome 1 (NIPA1)

Human protein-coding gene NIPA1. Represented by 211 ESTs from 132 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 902544 - Hs.511797]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_653200.2 NIPA1 gene product H. sapiens 100.0 328
XP_001106326.1 PREDICTED: magnesium transporter NIPA1-like M. mulatta 100.0 326
XP_545798.2 PREDICTED: magnesium transporter NIPA1 C. lupus familiaris 100.0 325
XP_003900730.1 PREDICTED: magnesium transporter NIPA1 P. anubis 100.0 324
NP_705806.1 Nipa1 gene product M. musculus 100.0 319
NP_001100989.1 magnesium transporter NIPA1 R. norvegicus 100.0 319
XP_585327.4 PREDICTED: uncharacterized protein LOC539162 B. taurus 99.7 336
XP_004004520.1 PREDICTED: magnesium transporter NIPA1 O. aries 99.6 253
NP_001089253.1 non imprinted in Prader-Willi/Angelman syndrome 1 X. laevis 77.5 298
NP_001006062.1 nipa1 gene product D. rerio 66.5 290
NP_179708.2 uncharacterized protein A. thaliana 47.6 189
NP_001040884.2 Protein NIPA-1, isoform b C. elegans 45.8 168
NP_609586.1 spichthyin, isoform A D. melanogaster 45.8 168
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_002718327.1 PREDICTED: non-imprinted in Prader-Willi/Angelman syndrome 1-like O. cuniculus 99.4 323
XP_001366294.1 PREDICTED: magnesium transporter NIPA1-like M. domestica 98.7 317

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; pancreas; muscle; mammary gland; placenta; cervix; kidney; blood; embryonic tissue; mixed; thyroid; uterus; prostate; adrenal gland; mouth; testis; thymus; spleen; trachea; bone; esophagus; eye; liver; skin; intestine; stomach; lung; vascular; ascites; heart; lymph node; connective tissue; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q11.2
UniSTS entry: Chr 15 G19907
UniSTS entry: Chr 15 A002B45
UniSTS entry: Chr 15 D15S912
UniSTS entry: Chr 15 RH11248 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AB089319.1 Homo sapiens mRNA for hypothetical protein, complete cds PA
BX648722.1 Homo sapiens mRNA; cDNA DKFZp686N0847 (from clone DKFZp686N0847) PA
AK057846.1 Homo sapiens cDNA FLJ25117 fis, clone CBR05757 P
AK314073.1 Homo sapiens cDNA, FLJ94740, Homo sapiens non-imprinted in Prader-Willi/Angelman syndrome 1(NIPA1), mRNA P
BC025678.1 Homo sapiens non imprinted in Prader-Willi/Angelman syndrome 1, mRNA (cDNA clone IMAGE:5203620), partial cds PA
NM_144599.4 Homo sapiens non imprinted in Prader-Willi/Angelman syndrome 1 (NIPA1), transcript variant 1, mRNA PA
NM_001142275.1 Homo sapiens non imprinted in Prader-Willi/Angelman syndrome 1 (NIPA1), transcript variant 2, mRNA PA

EST sequences (10 of 211) [Show all sequences]

AA905257.1 Clone IMAGE:1507448 mixed 3' read A
BX095977.1 Clone IMAGp998I22270_;_IMAGE:45050 brain
AI168601.1 Clone IMAGE:1656034 mixed 3' read A
CB160944.1 Clone L18POOL1n1-35-G08 liver 5' read
CB117286.1 Clone L4SNU368-26-G05 liver 5' read
AA887798.1 Clone IMAGE:1161551 intestine 3' read A
AI310524.1 Clone IMAGE:1914694 kidney 3' read A
AI359989.1 Clone IMAGE:2019111 brain 3' read A
AI424510.1 Clone IMAGE:2103852 brain 3' read A
AI572974.1 Clone IMAGE:2174343 lymph node 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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