> Heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRNPC)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:724007     UniGene Hs.508848     Homo sapiens (human)   HNRNPC Order cDNA clone, Links
Heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRNPC)

Human protein-coding gene HNRNPC. Represented by 2708 ESTs from 600 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 724007 - Hs.508848]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001096357.1 PREDICTED: heterogeneous nuclear ribonucleoproteins C1/C2-like isoform 5 M. mulatta 100.0 305
NP_112604.2 HNRNPC gene product H. sapiens 100.0 305
NP_001233371.1 HNRNPC gene product P. troglodytes 100.0 292
XP_003894956.1 PREDICTED: heterogeneous nuclear ribonucleoprotein C-like 1-like isoform 1 P. anubis 100.0 291
NP_001029567.1 HNRNPC gene product B. taurus 99.7 293
NP_058580.1 Hnrnpc gene product M. musculus 98.4 312
NP_001081360.1 heterogeneous nuclear ribonucleoprotein C X. laevis 88.7 281
NP_957287.1 zgc:55733 gene product D. rerio 81.0 284
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
NP_001230622.1 HNRNPC gene product S. scrofa 99.4 312
XP_863848.1 PREDICTED: heterogeneous nuclear ribonucleoprotein C-like 1 isoform 22 C. lupus familiaris 99.3 306

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; testis; embryonic tissue; placenta; uterus; lung; skin; eye; liver; blood; mixed; intestine; prostate; kidney; pancreas; mammary gland; lymph node; cervix; lymph; stomach; ovary; connective tissue; bone; heart; thymus; bone marrow; pineal gland; muscle; bladder; thyroid; mouth; pharynx; pituitary gland; esophagus; ascites; spleen; adrenal gland; salivary gland; ear; vascular; tonsil; trachea; larynx; parathyroid; ganglia; nerve; umbilical cord; adipose tissue; amniotic fluid; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q11.2
UniSTS entry: Chr 1 RH80802
UniSTS entry: Chr 2 G43228
UniSTS entry: Chr 14 RH70234
UniSTS entry: Chr 14 RH68331
UniSTS entry: Chr 14 RH66344
UniSTS entry: Chr 14 WI-19322 [Map Viewer]
UniSTS entry: Chr 15 HNRPC_2223
UniSTS entry: Chr 1 G35510
UniSTS entry: Chr 11 RH133947
UniSTS entry: Chr 1 D1S1425
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (32)

BX161480.1 human full-length cDNA clone CS0DI085YM22 of Placenta of Homo sapiens (human) P
BX247992.1 human full-length cDNA clone CS0DG007YK20 of B cells (Ramos cell line) of Homo sapiens (human) PA
BX247961.1 human full-length cDNA clone CS0DA009YK08 of Neuroblastoma of Homo sapiens (human) P
M29063.1 Human hnRNP C2 protein mRNA PA
AK126950.1 Homo sapiens cDNA FLJ45003 fis, clone BRAWH3011623, highly similar to Heterogeneous nuclear ribonucleoproteins C P
NM_004500.3 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRNPC), transcript variant 2, mRNA P
BC066932.1 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2), mRNA (cDNA clone MGC:87239 IMAGE:4375450), complete cds PA
BC071943.1 Homo sapiens cDNA clone IMAGE:3688181, containing frame-shift errors PA
M16342.1 Human nuclear ribonucleoprotein particle (hnRNP) C protein mRNA, complete cds P
BC089438.1 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2), mRNA (cDNA clone MGC:105117 IMAGE:30555817), complete cds PA
AB209527.1 Homo sapiens mRNA for Heterogeneous nuclear ribonucleoproteins C1/C2 variant protein P
BC092433.1 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2), mRNA (cDNA clone IMAGE:30374039), complete cds A
AK223517.1 Homo sapiens mRNA for Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) variant, clone: FCC123A10 PA
BC103758.1 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2), mRNA (cDNA clone MGC:117353 IMAGE:6187512), complete cds PA
BC108658.1 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2), mRNA (cDNA clone MGC:131677 IMAGE:6501821), complete cds PA
BC003394.1 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2), mRNA (cDNA clone MGC:5418 IMAGE:3447724), complete cds PA
AK225032.1 Homo sapiens mRNA for Full-length cDNA clone CS0DI085YM22 of Placenta variant, clone: adKA02528 PA
NM_001077443.1 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRNPC), transcript variant 4, mRNA P
NM_001077442.1 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRNPC), transcript variant 3, mRNA P
NM_031314.2 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRNPC), transcript variant 1, mRNA P
BC007052.1 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2), mRNA (cDNA clone MGC:12469 IMAGE:3686841), complete cds PA
BC008423.1 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2), mRNA (cDNA clone MGC:14574 IMAGE:4102910), complete cds PA
BC008364.1 Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2), mRNA (cDNA clone MGC:3150 IMAGE:3354131), complete cds PA
AK292619.1 Homo sapiens cDNA FLJ75154 complete cds, highly similar to Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2), mRNA P
AK312382.1 Homo sapiens cDNA, FLJ92712, highly similar to Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRPC), transcript variant 1, mRNA P
AK312338.1 Homo sapiens cDNA, FLJ92657, highly similar to Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRPC), transcript variant 2, mRNA P
AL833432.1 Homo sapiens mRNA; cDNA DKFZp313O1739 (from clone DKFZp313O1739) PA
AK299923.1 Homo sapiens cDNA FLJ52975 complete cds, highly similar to Heterogeneous nuclear ribonucleoproteins C P
AK297482.1 Homo sapiens cDNA FLJ52993 complete cds, highly similar to Heterogeneous nuclear ribonucleoprotein C P
AK298906.1 Homo sapiens cDNA FLJ54127 complete cds, highly similar to Heterogeneous nuclear ribonucleoproteins C PA
AK302213.1 Homo sapiens cDNA FLJ53542 complete cds, highly similar to Heterogeneous nuclear ribonucleoproteins C P
Z70766.1 H.sapiens mRNA for heterogeneous nuclear ribonucleoprotein c1/c2 (partial)

EST sequences (10 of 2708) [Show all sequences]

AA974264.1 Clone IMAGE:1586293 uncharacterized tissue 3' read A
R14686.1 Clone IMAGE:30265 brain 5' read
AA991479.1 Clone IMAGE:1612756 uncharacterized tissue 3' read PA
AA993078.1 Clone IMAGE:1625023 embryonic tissue 3' read
AI000384.1 Clone IMAGE:1614066 uncharacterized tissue 3' read A
AI000456.1 Clone IMAGE:1614148 uncharacterized tissue 3' read A
AI016391.1 Clone IMAGE:1641649 testis 3' read A
AA922896.1 Clone IMAGE:1551001 uncharacterized tissue 3' read
AI024510.1 Clone IMAGE:1631388 mammary gland 3' read A
AI025965.1 Clone IMAGE:1646650 parathyroid 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help