> Pre-B-cell leukemia homeobox interacting protein 1 (PBXIP1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:720965     UniGene Hs.505806     Homo sapiens (human)   PBXIP1 Order cDNA clone, Links
Pre-B-cell leukemia homeobox interacting protein 1 (PBXIP1)

Human protein-coding gene PBXIP1. Represented by 1092 ESTs from 293 cDNA libraries. Corresponds to reference sequence NM_020524.2. [UniGene 720965 - Hs.505806]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_065385.2 PBXIP1 gene product H. sapiens 100.0 730
NP_666243.1 pre-B-cell leukemia transcription factor-interacting protein 1 M. musculus 76.2 726
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_514433.4 PREDICTED: pre-B-cell leukemia transcription factor-interacting protein 1 P. troglodytes 98.7 618
XP_003892783.1 PREDICTED: pre-B-cell leukemia transcription factor-interacting protein 1 isoform 1 P. anubis 96.9 738

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; thymus; testis; placenta; pancreas; blood; prostate; mouth; lung; stomach; uterus; pituitary gland; trachea; spleen; connective tissue; embryonic tissue; intestine; heart; eye; kidney; adrenal gland; uncharacterized tissue; lymph node; mixed; skin; nerve; liver; thyroid; parathyroid; vascular; mammary gland; bone; bladder; ovary; adipose tissue; muscle; cervix; bone marrow; esophagus; lymph; ear; ascites; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21.3
UniSTS entry: Chr 1 Cda0tg01 [Map Viewer]
UniSTS entry: Chr 1 A002B11 [Map Viewer]
UniSTS entry: Chr 1 RH15903 [Map Viewer]
UniSTS entry: Chr 1 PBXIP1_8075
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

AK022497.1 Homo sapiens cDNA FLJ12435 fis, clone NT2RM1000059 P
AK023219.1 Homo sapiens cDNA FLJ13157 fis, clone NT2RP3003543 P
AF221521.1 Homo sapiens hematopoietic PBX-interacting protein mRNA, complete cds P
NM_020524.2 Homo sapiens pre-B-cell leukemia homeobox interacting protein 1 (PBXIP1), mRNA PA
BC127910.1 Homo sapiens cDNA clone IMAGE:40132874, partial cds P
BC127909.1 Homo sapiens cDNA clone IMAGE:40132872, partial cds P
BC016852.1 Homo sapiens pre-B-cell leukemia homeobox interacting protein 1, mRNA (cDNA clone MGC:16853 IMAGE:3900461), complete cds PA
AK315551.1 Homo sapiens cDNA, FLJ96621 P
AK310712.1 Homo sapiens cDNA, FLJ17754 P
AK310388.1 Homo sapiens cDNA, FLJ17430 P
AK300987.1 Homo sapiens cDNA FLJ58285 complete cds, highly similar to Homo sapiens pre-B-cell leukemia transcription factor interacting protein 1 (PBXIP1), mRNA P
AK300544.1 Homo sapiens cDNA FLJ57088 complete cds, highly similar to Homo sapiens pre-B-cell leukemia transcription factor interacting protein 1 (PBXIP1), mRNA P
AK303863.1 Homo sapiens cDNA FLJ58464 complete cds, highly similar to Homo sapiens pre-B-cell leukemia transcription factor interacting protein 1 (PBXIP1), mRNA P
AK303413.1 Homo sapiens cDNA FLJ58659 complete cds, highly similar to Homo sapiens pre-B-cell leukemia transcription factor interacting protein 1 (PBXIP1), mRNA P
U00952.1 Human clone A9A2BRB7 (CAC)n/(GTG)n repeat-containing mRNA P

EST sequences (10 of 1092) [Show all sequences]

AA985132.1 Clone IMAGE:1616261 brain 3' read P
AA994827.1 Clone IMAGE:1635126 kidney 3' read A
AA908250.1 Clone IMAGE:1522628 lung 3' read
AI022873.1 Clone IMAGE:1650635 parathyroid 3' read A
AI026659.1 Clone IMAGE:1645611 testis 3' read A
CB050761.1 Clone IMAGE:3272270 prostate 3' read A
CB068574.1 Clone IMAGE:6553802 pancreas 3' read A
BX108234.1 Clone IMAGp998D18315_;_IMAGE:173537 brain
AI188339.1 Clone IMAGE:1723080 placenta 3' read A
AI188694.1 Clone IMAGE:1723357 placenta 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help