> Ubiquitin specific peptidase 28 (USP28)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:719050     UniGene Hs.503891     Homo sapiens (human)   USP28 Order cDNA clone, Links
Ubiquitin specific peptidase 28 (USP28)

Human protein-coding gene USP28. Represented by 150 ESTs from 95 cDNA libraries. EST representation biased toward blastocyst. Corresponds to reference sequence NM_020886.2. [UniGene 719050 - Hs.503891]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_065937.1 USP28 gene product H. sapiens 100.0 1076
XP_003313357.2 PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 28 P. troglodytes 99.8 1076
XP_001085291.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 28 isoform 1 M. mulatta 99.5 1076
NP_780691.2 ubiquitin carboxyl-terminal hydrolase 28 M. musculus 94.0 1050
NP_001001886.1 usp25 gene product D. rerio 61.0 1046
NP_001086746.1 ubiquitin specific peptidase 25 X. laevis 59.4 1022
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_003910774.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 28-like P. anubis 99.3 827
XP_004016085.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 28 O. aries 96.5 923

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: blastocyst [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; heart; mouth; lung; testis; embryonic tissue; brain; bone marrow; prostate; liver; vascular; mixed; intestine; muscle; mammary gland; blood; kidney; bladder; trachea; cervix; uterus; placenta; salivary gland; lymph; skin; stomach; lymph node; eye; pancreas; pharynx; parathyroid; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q23
UniSTS entry: Chr 1 D12S1332 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK123255.1 Homo sapiens cDNA FLJ41261 fis, clone BRAMY2034920
BC065928.1 Homo sapiens ubiquitin specific peptidase 28, mRNA (cDNA clone MGC:70638 IMAGE:6140725), complete cds PA
AB040948.1 Homo sapiens mRNA for KIAA1515 protein, partial cds P
AK027521.1 Homo sapiens cDNA FLJ14615 fis, clone NT2RP1001248 P
AF266283.1 Homo sapiens ubiquitin specific protease (USP28) mRNA, complete cds P
NM_020886.2 Homo sapiens ubiquitin specific peptidase 28 (USP28), mRNA PA
AK097623.1 Homo sapiens cDNA FLJ40304 fis, clone TESTI2029227, weakly similar to UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21 (EC 3.1.2.15) P
AK304770.1 Homo sapiens cDNA FLJ58236 complete cds, highly similar to Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15) P
AK304376.1 Homo sapiens cDNA FLJ61554 complete cds, highly similar to Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15) P
BC035986.1 Homo sapiens ubiquitin specific peptidase 28, mRNA (cDNA clone IMAGE:4109294), with apparent retained intron PA

EST sequences (10 of 150) [Show all sequences]

AI026007.1 Clone IMAGE:1645748 parathyroid 3' read PA
AI337094.1 Clone IMAGE:2009559 uncharacterized tissue 3' read A
AI374954.1 Clone IMAGE:2048863 embryonic tissue 3' read
AI609285.1 Clone IMAGE:2266337 mouth 3' read A
AI659851.1 Clone IMAGE:2251444 prostate 3' read A
AI671626.1 Clone IMAGE:2308289 uncharacterized tissue 3' read A
BX282678.1 Clone IMAGp998K0313287_;_IMAGE:6044666 uncharacterized tissue P
AI818892.1 Clone IMAGE:2424763 uterus 3' read A
AI923030.1 Clone IMAGE:2452273 uterus 3' read PA
CB990391.1 Clone IMAGE:30340450 placenta 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help