> Carnitine palmitoyltransferase 1A (liver) (CPT1A)
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UGID:718202     UniGene Hs.503043     Homo sapiens (human)   CPT1A Order cDNA clone, Links
Carnitine palmitoyltransferase 1A (liver) (CPT1A)

Human protein-coding gene CPT1A. Represented by 212 ESTs from 119 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 718202 - Hs.503043]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001867.2 CPT1A gene product H. sapiens 100.0 772
XP_001173853.1 PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform isoform 6 P. troglodytes 99.9 772
NP_038523.2 carnitine O-palmitoyltransferase 1, liver isoform M. musculus 88.8 772
NP_001079706.1 carnitine palmitoyltransferase 1A (liver) X. laevis 79.6 767
XP_002666893.2 PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform D. rerio 75.3 773
NP_523685.2 withered, isoform A D. melanogaster 59.5 760
NP_496721.2 Protein CPT-1 C. elegans 50.9 765
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_003909491.1 PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform P. anubis 98.7 746
XP_001101846.1 PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform isoform 1 M. mulatta 98.6 772

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: intestine; brain; thyroid; ovary; testis; blood; vascular; thymus; eye; uncharacterized tissue; mixed; kidney; esophagus; mammary gland; prostate; placenta; muscle; mouth; connective tissue; cervix; bone marrow; embryonic tissue; trachea; uterus; bladder; skin; pancreas; bone; liver; lung; stomach; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q13.2
UniSTS entry: Chr 11 SHGC-32786 [Map Viewer]
UniSTS entry: Chr 11 WI-11974 [Map Viewer]
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 RH79802
UniSTS entry: Chr 1 GDB:631813
UniSTS entry: Chr 1 PMC156606P2
UniSTS entry: Chr 1 D8S2278
UniSTS entry: Chr 1 sY3084
UniSTS entry: Chr 11 D11S1183
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BT009791.1 Homo sapiens carnitine palmitoyltransferase 1A (liver) mRNA, complete cds P
NM_001876.3 Homo sapiens carnitine palmitoyltransferase 1A (liver) (CPT1A), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA PA
AK172798.1 Homo sapiens cDNA FLJ23959 fis, clone HEP14351, highly similar to Carnitine O-palmitoyltransferase I, mitochondrial liver isoform (EC 2.3.1.21) PA
AK025307.1 Homo sapiens cDNA: FLJ21654 fis, clone COL08589, highly similar to HUMCAPA Homo sapiens mitochondrial carnitine palmitoyltransferase I mRNA PA
NM_001031847.2 Homo sapiens carnitine palmitoyltransferase 1A (liver) (CPT1A), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA PA
BC000185.1 Homo sapiens carnitine palmitoyltransferase 1A (liver), mRNA (cDNA clone MGC:1772 IMAGE:3352642), complete cds PA
AJ420378.1 Homo sapiens partial mRNA for carnitine palmitoyltransferase I (CPT1A gene)
L39211.1 Homo sapiens mitochondrial carnitine palmitoyltransferase I mRNA, complete cds P
AK314301.1 Homo sapiens cDNA, FLJ95058, highly similar to Homo sapiens carnitine palmitoyltransferase 1A (liver) (CPT1A),nuclear gene encoding mitochondrial protein, mRNA P
AK309464.1 Homo sapiens cDNA, FLJ99505 P

EST sequences (10 of 212) [Show all sequences]

R28631.1 Clone IMAGE:133565 placenta 3' read A
CB121352.1 Clone L3SNU475s1-21-C11 liver 5' read A
CB112326.1 Clone L6ChoCK0-5-A05 liver 5' read
R32561.1 Clone IMAGE:133565 placenta 5' read
AI424750.1 Clone IMAGE:2089602 mixed 3' read A
AI494179.1 Clone IMAGE:2130484 kidney 5' read
AI627951.1 Clone IMAGE:2285657 kidney 3' read A
AU280055.1 Clone N1ESE1000022 embryonic tissue 5' read P
F26312.1 Clone s4000052E10 muscle
AI670068.1 Clone IMAGE:2314886 prostate 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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