> Solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 (SLC3A2)
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UGID:717928     UniGene Hs.502769     Homo sapiens (human)   SLC3A2 Order cDNA clone, Links
Solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 (SLC3A2)

Human protein-coding gene SLC3A2. Represented by 3725 ESTs from 543 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 717928 - Hs.502769]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001012680.1 SLC3A2 gene product H. sapiens 100.0 630
XP_001159413.2 PREDICTED: uncharacterized protein LOC451271 isoform 4 P. troglodytes 100.0 629
NP_001154885.1 4F2 cell-surface antigen heavy chain isoform a M. musculus 81.2 564
NP_958922.2 solute carrier family 3, member 2b D. rerio 59.8 296
NP_001079446.1 solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 X. laevis 58.3 537
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001118395.2 PREDICTED: 4F2 cell-surface antigen heavy chain-like M. mulatta 95.5 492
XP_003909719.1 PREDICTED: 4F2 cell-surface antigen heavy chain isoform 2 P. anubis 94.6 687

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; placenta; uncharacterized tissue; connective tissue; mammary gland; kidney; intestine; skin; uterus; lung; esophagus; stomach; liver; ascites; blood; embryonic tissue; cervix; prostate; eye; thymus; pancreas; adrenal gland; heart; bladder; ovary; spleen; mixed; vascular; trachea; muscle; ear; mouth; bone; parathyroid; bone marrow; umbilical cord; thyroid; lymph; pineal gland; adipose tissue; larynx; lymph node; nerve; tonsil; salivary gland; ganglia; amniotic fluid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q13
UniSTS entry: Chr 11 RH98739
UniSTS entry: Chr 11 GDB:197851
UniSTS entry: Chr 11 G15889
UniSTS entry: Chr 11 RH17582 [Map Viewer]
UniSTS entry: Chr 15 Rnu2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

AB018010.1 Homo sapiens mRNA for 4F2 heavy chain, complete cds P
NM_002394.5 Homo sapiens solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 (SLC3A2), transcript variant 3, mRNA P
J02769.1 Human 4F2 antigen heavy chain mRNA, complete cds P
J02939.1 Human membrane glycoprotein 4F2 antigen heavy chain mRNA P
NM_001013251.2 Homo sapiens solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 (SLC3A2), transcript variant 6, mRNA P
NM_001012664.2 Homo sapiens solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 (SLC3A2), transcript variant 5, mRNA P
NM_001012662.2 Homo sapiens solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 (SLC3A2), transcript variant 2, mRNA P
AK025584.1 Homo sapiens cDNA: FLJ21931 fis, clone HEP04314, highly similar to AB018010 Homo sapiens mRNA for 4F2 heavy chain PA
BC003000.1 Homo sapiens solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2, mRNA (cDNA clone MGC:3977 IMAGE:2821990), complete cds PA
BC001061.2 Homo sapiens solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2, mRNA (cDNA clone MGC:2307 IMAGE:3505759), complete cds PA
AK225304.1 Homo sapiens mRNA for solute carrier family 3, member 2 isoform a variant, clone: HEP01460 P
AK311592.1 Homo sapiens cDNA, FLJ18634 P
AK308797.1 Homo sapiens cDNA, FLJ98838 P
AK090758.1 Homo sapiens cDNA FLJ33439 fis, clone BRACE2021695, highly similar to 4F2 CELL-SURFACE ANTIGEN HEAVY CHAIN P
AK304685.1 Homo sapiens cDNA FLJ53699 complete cds, moderately similar to 4F2 cell-surface antigen heavy chain P
AK304497.1 Homo sapiens cDNA FLJ54090 complete cds, highly similar to 4F2 cell-surface antigen heavy chain P
NR_037193.1 Homo sapiens solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 (SLC3A2), transcript variant 7, non-coding RNA P
J03569.1 Human lymphocyte activation antigen 4F2 large subunit mRNA, complete cds P
AF055031.1 Homo sapiens clone 24551 mRNA sequence PA

EST sequences (10 of 3725) [Show all sequences]

AA991599.1 Clone IMAGE:1609755 mammary gland 3' read A
AA991600.1 Clone IMAGE:1609757 mammary gland 3' read A
AA994215.1 Clone IMAGE:1631150 mammary gland 3' read A
AA995442.1 Clone IMAGE:1612065 uncharacterized tissue 3' read
AA995481.1 Clone IMAGE:1610426 uncharacterized tissue 3' read A
AA995839.1 Clone IMAGE:1611946 uncharacterized tissue 3' read A
AA902714.1 Clone IMAGE:1519439 uncharacterized tissue 3' read P
AA907892.1 Clone IMAGE:1520263 kidney 3' read A
AI017676.1 Clone IMAGE:1636682 kidney 3' read PA
AI023096.1 Clone IMAGE:1650511 parathyroid 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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