> Spleen focus forming virus (SFFV) proviral integration oncogene spi1 (SPI1)
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UGID:717670     UniGene Hs.502511     Homo sapiens (human)   SPI1 Links
Spleen focus forming virus (SFFV) proviral integration oncogene spi1 (SPI1)

Human protein-coding gene SPI1. Represented by 132 ESTs from 50 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 717670 - Hs.502511]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001074016.1 SPI1 gene product H. sapiens 100.0 270
XP_508411.3 PREDICTED: transcription factor PU.1 P. troglodytes 100.0 174
XP_003909977.1 PREDICTED: transcription factor PU.1 P. anubis 99.6 269
NP_035485.1 Sfpi1 gene product M. musculus 93.8 271
NP_932328.1 spi1b gene product D. rerio 70.5 288
NP_001079648.1 Spi-B transcription factor (Spi-1/PU.1 related) X. laevis 62.5 243
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_001100894.2 PREDICTED: transcription factor PU.1-like M. mulatta 98.9 184
XP_853990.1 PREDICTED: transcription factor PU.1 C. lupus familiaris 98.5 269

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lymph node; blood; brain; tonsil; uncharacterized tissue; lung; mixed; spleen; prostate; liver; lymph; placenta; eye; thymus; testis; intestine; kidney; ovary; connective tissue; stomach; heart; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p11.2
UniSTS entry: Chr 11 GDB:197862
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_003120.2 Homo sapiens spleen focus forming virus (SFFV) proviral integration oncogene spi1 (SPI1), transcript variant 2, mRNA PA
NM_001080547.1 Homo sapiens spleen focus forming virus (SFFV) proviral integration oncogene spi1 (SPI1), transcript variant 1, mRNA PA
AK310065.1 Homo sapiens cDNA, FLJ17107 P
X52056.1 Human mRNA for spi-1 proto-oncogene P

EST sequences (10 of 132) [Show all sequences]

AA961635.1 Clone IMAGE:1579739 mixed 3' read
R08560.1 Clone IMAGE:127394 mixed 3' read
AI031851.1 Clone IMAGE:1668793 brain 3' read
AA886973.1 Clone IMAGE:1476544 uncharacterized tissue 3' read
AI333832.1 Clone IMAGE:1930630 lung 3' read
AI367109.1 Clone IMAGE:1873947 intestine 3' read
AI381529.1 Clone IMAGE:2092619 mixed 3' read
AI475119.1 Clone IMAGE:2162828 brain 3' read
AI572286.1 Clone IMAGE:2089063 mixed 3' read
AI400575.1 Clone IMAGE:2115837 mixed 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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