> Basigin (Ok blood group) (BSG)
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UGID:716452     UniGene Hs.501293     Homo sapiens (human)   BSG Order cDNA clone, Links
Basigin (Ok blood group) (BSG)

Human protein-coding gene BSG. Represented by 3546 ESTs from 545 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 716452 - Hs.501293]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001719.2 BSG gene product H. sapiens 100.0 384
NP_033898.1 basigin isoform 1 precursor M. musculus 71.0 388
NP_001091230.1 uncharacterized protein LOC100037021 precursor X. laevis 54.9 385
NP_937785.1 bsg gene product D. rerio 52.5 367
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_003954432.1 PREDICTED: LOW QUALITY PROTEIN: basigin P. troglodytes 97.6 204
XP_001117081.2 PREDICTED: basigin-like M. mulatta 92.7 384

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; testis; embryonic tissue; lung; intestine; skin; uncharacterized tissue; eye; kidney; pancreas; mixed; prostate; esophagus; liver; heart; ovary; uterus; bone marrow; thyroid; mammary gland; cervix; ascites; blood; stomach; connective tissue; bone; adrenal gland; muscle; vascular; thymus; lymph; bladder; lymph node; mouth; salivary gland; tonsil; ear; adipose tissue; trachea; spleen; nerve; ganglia; pineal gland; epididymis; umbilical cord; parathyroid; pharynx; peritoneum; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.3
UniSTS entry: Chr 19 RH80808
UniSTS entry: RH79940
UniSTS entry: STS-D29322
UniSTS entry: Chr 1 D1S3694
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

AB091680.1 Homo sapiens hEMMPRIN mRNA for cervical EMMPRIN, complete cds P
AB085790.1 Homo sapiens mRNA for CD147, complete cds P
AY358113.1 Homo sapiens clone DNA173157 EMMPRIN (UNQ6505) mRNA, complete cds P
NM_001728.3 Homo sapiens basigin (Ok blood group) (BSG), transcript variant 1, mRNA PA
NM_198589.2 Homo sapiens basigin (Ok blood group) (BSG), transcript variant 2, mRNA PA
NM_198591.2 Homo sapiens basigin (Ok blood group) (BSG), transcript variant 4, mRNA PA
NM_198590.2 Homo sapiens basigin (Ok blood group) (BSG), transcript variant 3, mRNA PA
D45131.1 Homo sapiens BSG mRNA for basigin, complete cds P
BC009040.2 Homo sapiens basigin (Ok blood group), mRNA (cDNA clone MGC:17700 IMAGE:3867352), complete cds PA
M87879.1 Human (5F7) mRNA, complete cds P
L20471.1 Human extracellular matrix metalloproteinase inducer gene, complete cds P
AB072923.1 Homo sapiens mRNA for EMMPRIN, complete cds P
AK297880.1 Homo sapiens cDNA FLJ52708 complete cds, highly similar to Basigin precursor P
AK296858.1 Homo sapiens cDNA FLJ52516 complete cds, moderately similar to Basigin precursor P
AK302231.1 Homo sapiens cDNA FLJ61188 complete cds, highly similar to Basigin precursor P
X64364.1 H.sapiens mRNA for M6 antigen PA
GU557065.1 Homo sapiens basigin isoform 4 (BSG) mRNA, complete cds PA
GU557064.1 Homo sapiens basigin isoform 3 (BSG) mRNA, complete cds PA
L10240.1 Human collagenase stimulatory factor (EMMPRIN) mRNA, complete cds P
AF548371.1 Homo sapiens basigin long isoform (BSG) mRNA, complete cds; alternatively spliced P

EST sequences (10 of 3546) [Show all sequences]

AA972539.1 Clone IMAGE:1575893 intestine 3' read A
AA977932.1 Clone IMAGE:1590763 kidney 3' read A
AA983488.1 Clone IMAGE:1598839 uncharacterized tissue 3' read
AA987804.1 Clone IMAGE:1588858 kidney 3' read A
AI000817.1 Clone IMAGE:1609336 mammary gland 3' read A
AA902584.1 Clone IMAGE:1502682 kidney 3' read A
AA903563.1 Clone IMAGE:1518614 uncharacterized tissue 3' read A
AA910392.1 Clone IMAGE:1521122 lung 3' read P
AI003696.1 Clone IMAGE:392100 pineal gland 3' read A
AI032128.1 Clone IMAGE:1611264 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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