> Thyroid hormone receptor interactor 4 (TRIP4)
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UGID:715499     UniGene Hs.500340     Homo sapiens (human)   TRIP4 Order cDNA clone, Links
Thyroid hormone receptor interactor 4 (TRIP4)

Human protein-coding gene TRIP4. Represented by 275 ESTs from 156 cDNA libraries. Corresponds to reference sequence NM_016213.4. [UniGene 715499 - Hs.500340]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_510472.2 PREDICTED: activating signal cointegrator 1 isoform 3 P. troglodytes 100.0 580
NP_057297.2 TRIP4 gene product H. sapiens 100.0 580
XP_003901100.1 PREDICTED: activating signal cointegrator 1 P. anubis 99.8 580
XP_001107836.1 PREDICTED: activating signal cointegrator 1 isoform 3 M. mulatta 99.7 580
NP_062771.2 Trip4 gene product M. musculus 92.8 580
NP_001085378.1 thyroid hormone receptor interactor 4 X. laevis 70.2 561
NP_001071043.2 trip4 gene product D. rerio 68.8 560
NP_608393.1 CG11710, isoform B D. melanogaster 47.1 155
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_002718147.1 PREDICTED: thyroid hormone receptor interactor 4 O. cuniculus 95.2 580
XP_001498645.1 PREDICTED: activating signal cointegrator 1 E. caballus 93.5 580

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: connective tissue; brain; intestine; mixed; uncharacterized tissue; lung; placenta; uterus; embryonic tissue; heart; lymph; liver; lymph node; bone marrow; skin; prostate; testis; esophagus; mammary gland; kidney; adrenal gland; thymus; trachea; bone; muscle; stomach; bladder; blood; mouth; ear; eye; ovary; pancreas; thyroid; vascular; amniotic fluid; parathyroid; ascites
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q22.31
UniSTS entry: Chr 15 RH78914 [Map Viewer]
UniSTS entry: Chr 2 ha3312
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_016213.4 Homo sapiens thyroid hormone receptor interactor 4 (TRIP4), mRNA PA
L40371.1 Homo sapiens thyroid receptor interactor (TRIP4) mRNA, 3' end of cds P
BC012448.1 Homo sapiens thyroid hormone receptor interactor 4, mRNA (cDNA clone MGC:8719 IMAGE:3882630), complete cds PA
AK314319.1 Homo sapiens cDNA, FLJ95077, highly similar to Homo sapiens thyroid hormone receptor interactor 4 (TRIP4), mRNA P
AK000433.1 Homo sapiens cDNA FLJ20426 fis, clone KAT03061 A

EST sequences (10 of 275) [Show all sequences]

AA969987.1 Clone IMAGE:1581293 mixed 3' read A
R15144.1 Clone IMAGE:29532 brain 5' read P
AI005154.1 Clone IMAGE:1626137 mixed 3' read
AI005621.1 Clone IMAGE:1637421 uncharacterized tissue 3' read A
AI034159.1 Clone IMAGE:1646901 parathyroid 3' read A
AI131094.1 Clone IMAGE:1706277 heart 3' read P
AI151174.1 Clone IMAGE:1721249 uterus 3' read P
BX096818.1 Clone IMAGp998H071935_;_IMAGE:785334 embryonic tissue PA
AI191396.1 Clone IMAGE:1741796 lung 3' read A
CB122650.1 Clone L10ChoCK0-13-H06 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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