> Chemokine (C-C motif) ligand 19 (CCL19)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:137894     UniGene Hs.50002     Homo sapiens (human)   CCL19 Order cDNA clone, Links
Chemokine (C-C motif) ligand 19 (CCL19)

Human protein-coding gene CCL19. Represented by 91 ESTs from 36 cDNA libraries. Corresponds to reference sequence NM_006274.2. [UniGene 137894 - Hs.50002]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001164037.2 PREDICTED: c-C motif chemokine 19 isoform 1 P. troglodytes 100.0 97
NP_006265.1 CCL19 gene product H. sapiens 100.0 97
XP_001472218.1 PREDICTED: c-C motif chemokine 19-like M. musculus 78.2 101
Other hits (2 of 4) [Show all]SpeciesId(%)Len(aa)
NP_001028131.1 CCL19 gene product M. mulatta 98.0 97
XP_003911609.1 PREDICTED: c-C motif chemokine 19 P. anubis 98.0 97

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pharynx; vascular; lung; mixed; thymus; lymph node; prostate; uncharacterized tissue; heart; brain; eye; larynx; stomach; connective tissue; pancreas; spleen; intestine; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9p13
UniSTS entry: Chr 9 RH91355
UniSTS entry: Chr 9 STS-U77180 [Map Viewer]
UniSTS entry: Chr 9 SHGC-37670 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_006274.2 Homo sapiens chemokine (C-C motif) ligand 19 (CCL19), mRNA P
CR456868.1 Homo sapiens full open reading frame cDNA clone RZPDo834G0715D for gene CCL19, chemokine (C-C motif) ligand 19; complete cds, incl. stopcodon P
AK311945.1 Homo sapiens cDNA, FLJ92213, Homo sapiens chemokine (C-C motif) ligand 19 (CCL19), mRNA P
BC027968.1 Homo sapiens chemokine (C-C motif) ligand 19, mRNA (cDNA clone MGC:34433 IMAGE:5225849), complete cds PA
U77180.1 Human macrophage inflammatory protein 3 beta (MIP-3beta) mRNA, complete cds P
AB000887.1 Homo sapiens ELC mRNA for EBI1-ligand chemokine, complete cds P
U88321.1 Human beta chemokine Exodus-3 mRNA, complete cds P

EST sequences (10 of 91) [Show all sequences]

AI096411.1 Clone IMAGE:1707527 heart 3' read PA
BX105269.1 Clone IMAGp998P21668_;_IMAGE:299012 lung PA
AI186175.1 Clone IMAGE:1742023 lung 3' read PA
AI253509.1 Clone IMAGE:2032711 prostate 3' read A
AI224509.1 Clone IMAGE:1858420 mixed 3' read A
AI300458.1 Clone IMAGE:1908440 lung 3' read A
AI434231.1 Clone IMAGE:2132237 lymph node 3' read A
AI523424.1 Clone IMAGE:2128186 vascular 3' read PA
AI523429.1 Clone IMAGE:2128196 vascular 3' read
AI523431.1 Clone IMAGE:2128183 vascular 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help