> OTU domain containing 5 (OTUD5)
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UGID:711257     UniGene Hs.496098     Homo sapiens (human)   OTUD5 Order cDNA clone, Links
OTU domain containing 5 (OTUD5)

Human protein-coding gene OTUD5. Represented by 404 ESTs from 205 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 711257 - Hs.496098]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060072.1 OTUD5 gene product H. sapiens 100.0 570
XP_003917732.1 PREDICTED: OTU domain-containing protein 5 P. anubis 100.0 565
XP_001138973.1 PREDICTED: OTU domain-containing protein 5 P. troglodytes 99.8 570
XP_002719950.1 PREDICTED: OTU domain containing 5 O. cuniculus 99.8 565
XP_001917909.1 PREDICTED: OTU domain-containing protein 5-like E. caballus 99.8 478
XP_004022146.1 PREDICTED: OTU domain-containing protein 5 O. aries 99.7 348
XP_538031.1 PREDICTED: OTU domain-containing protein 5 isoform 1 C. lupus familiaris 99.7 565
NP_001032585.1 Otud5 gene product R. norvegicus 99.6 522
NP_613070.2 OTU domain-containing protein 5 M. musculus 99.5 565
NP_001088023.1 OTU domain-containing protein 5-B X. laevis 90.3 517
NP_001068578.1 otud5a gene product D. rerio 88.0 559
NP_973545.2 OTU-like cysteine type protease A. thaliana 53.7 244
NP_729724.2 CG6091, isoform D D. melanogaster 52.1 257
NP_500333.3 Protein OTUB-4 C. elegans 47.1 240
Other hits (2 of 36) [Show all]SpeciesId(%)Len(aa)
NP_001192567.1 OTU domain-containing protein 5 B. taurus 99.5 570
XP_003484155.1 PREDICTED: LOW QUALITY PROTEIN: OTU domain-containing protein 5-like S. scrofa 99.5 565

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; embryonic tissue; bladder; heart; trachea; liver; testis; adipose tissue; spleen; lymph; thymus; kidney; eye; esophagus; vascular; lung; mixed; mouth; skin; bone; stomach; intestine; prostate; bone marrow; muscle; pancreas; salivary gland; ovary; blood; mammary gland; uterus; connective tissue; cervix; tonsil; lymph node; ascites; placenta; thyroid; pharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp11.23
UniSTS entry: Chr X RH18187
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

NM_017602.3 Homo sapiens OTU domain containing 5 (OTUD5), transcript variant 1, mRNA PA
AL137509.1 Homo sapiens mRNA; cDNA DKFZp761A052 (from clone DKFZp761A052) PA
BC098440.1 Homo sapiens OTU domain containing 5, mRNA (cDNA clone MGC:104871 IMAGE:4840926), complete cds PA
AK022612.1 Homo sapiens cDNA FLJ12550 fis, clone NT2RM4000698 P
AK026260.1 Homo sapiens cDNA: FLJ22607 fis, clone HSI04846 PA
BC009917.2 Homo sapiens OTU domain containing 5, mRNA (cDNA clone MGC:2764 IMAGE:2958229), complete cds PA
BC011738.2 Homo sapiens OTU domain containing 5, mRNA (cDNA clone IMAGE:4334567) PA
BC028225.1 Homo sapiens OTU domain containing 5, mRNA (cDNA clone MGC:40086 IMAGE:5241560), complete cds PA
AK294590.1 Homo sapiens cDNA FLJ58178 complete cds, highly similar to Rattus norvegicus OTU domain containing 5 (Otud5), mRNA P
NM_001136159.1 Homo sapiens OTU domain containing 5 (OTUD5), transcript variant 4, mRNA PA
NM_001136158.1 Homo sapiens OTU domain containing 5 (OTUD5), transcript variant 3, mRNA PA
NM_001136157.1 Homo sapiens OTU domain containing 5 (OTUD5), transcript variant 2, mRNA PA

EST sequences (10 of 404) [Show all sequences]

AA927510.1 Clone IMAGE:1552580 uncharacterized tissue 3' read A
R18955.1 Clone IMAGE:33414 brain 5' read P
AI079983.1 Clone IMAGE:1678397 mixed 3' read A
AI143660.1 Clone IMAGE:1750654 brain 3' read A
CB045771.1 Clone IMAGE:3218403 intestine 3' read A
CB045772.1 Clone IMAGE:3218403 intestine 5' read P
CB050894.1 Clone IMAGE:3272325 prostate 5' read A
CB050893.1 Clone IMAGE:3272325 prostate 3' read A
CB052087.1 Clone IMAGE:3290296 uncharacterized tissue 3' read PA
CB052088.1 Clone IMAGE:3290296 uncharacterized tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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