Chromosome X open reading frame 38 (CXorf38)

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UGID:711120 UniGene Hs.495961 Homo sapiens (human) CXorf38

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Chromosome X open reading frame 38 (CXorf38)

Human protein-coding gene CXorf38. Represented by 117 ESTs from 88 cDNA libraries. Corresponds to reference sequence NM_144970.2. [UniGene 711120 - Hs.495961]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_659407.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CXorf38 gene product	H. sapiens	100.0	318
NP_780350.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	1810030O07Rik gene product	M. musculus	92.8	319
Other hits (2 of 14) [Show all]		Species	Id(%)	Len(aa)
XP_001085636.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein CXorf38-like	M. mulatta	98.8	318
XP_003917640.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein CXorf38 homolog	P. anubis	98.4	318

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	lung; embryonic tissue; lymph node; ovary; mammary gland; brain; pancreas; blood; placenta; kidney; prostate; intestine; thyroid; pituitary gland; connective tissue; liver; testis; stomach; heart; eye; spleen; bladder; mixed; trachea; cervix; ascites; lymph; bone; uterus; uncharacterized tissue; vascular; adipose tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	X
Map position:	Xp11.4
UniSTS entry:	Chr 1	D10S275
UniSTS entry:	Chr 1	L17709
UniSTS entry:	Chr 1	D15S1477

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK123989.1	Homo sapiens cDNA FLJ41995 fis, clone SPLEN2028914	P
AK021629.1	Homo sapiens cDNA FLJ11567 fis, clone HEMBA1003276	A
AK315384.1	Homo sapiens cDNA, FLJ96431	P
BC025334.1	Homo sapiens chromosome X open reading frame 38, mRNA (cDNA clone MGC:39350 IMAGE:4559938), complete cds	PA
NM_144970.2	Homo sapiens chromosome X open reading frame 38 (CXorf38), mRNA	PA
AK304539.1	Homo sapiens cDNA FLJ57450 complete cds	P

EST sequences (10 of 117) [Show all sequences]

BX098990.1	Clone IMAGp998G165285_;_IMAGE:2141223	stomach		PA
R25219.1	Clone IMAGE:132237	placenta	5' read
R27305.1	Clone IMAGE:132237	placenta	3' read	A
AI261614.1	Clone IMAGE:2028921	kidney	3' read	A
R30858.1	Clone IMAGE:134042	placenta	3' read
R30904.1	Clone IMAGE:134044	placenta	5' read
AI290049.1	Clone IMAGE:1990880	uterus	3' read
AI288711.1	Clone IMAGE:1881034	lung	3' read
AI299422.1	Clone IMAGE:1898428	lung	3' read
AI307216.1	Clone IMAGE:2054678	kidney	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria