> Inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein (IKBKAP)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:709897     UniGene Hs.494738     Homo sapiens (human)   IKBKAP Order cDNA clone, Links
Inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein (IKBKAP)

Human protein-coding gene IKBKAP. Represented by 419 ESTs from 196 cDNA libraries. Corresponds to reference sequence NM_003640.3. [UniGene 709897 - Hs.494738]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_003631.2 IKBKAP gene product H. sapiens 100.0 1331
NP_080355.2 Ikbkap gene product M. musculus 85.2 1332
NP_001089940.1 putative elongator complex protein 1 X. laevis 69.5 1159
XP_689534.4 PREDICTED: elongator complex protein 1 D. rerio 67.5 1318
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_001143066.2 PREDICTED: elongator complex protein 1 isoform 3 P. troglodytes 99.4 1311
XP_003911438.1 PREDICTED: elongator complex protein 1 isoform 1 P. anubis 98.0 1331

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mammary gland; mixed; uterus; testis; lung; adipose tissue; intestine; uncharacterized tissue; adrenal gland; lymph node; ovary; embryonic tissue; skin; eye; pharynx; muscle; liver; prostate; heart; mouth; placenta; stomach; amniotic fluid; trachea; pancreas; pituitary gland; kidney; thymus; larynx; blood; bladder; connective tissue; bone; thyroid; ascites; parathyroid; ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q31
UniSTS entry: Chr 9 WI-16073 [Map Viewer]
UniSTS entry: Chr 9 D9S1055E
UniSTS entry: Chr 9 D9S2068 [Map Viewer]
UniSTS entry: Chr 9 D9S1646
UniSTS entry: STS-N27516
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

AF044195.1 Homo sapiens IkappaB kinase complex associated protein (IKAP) mRNA, complete cds P
AL049945.1 Homo sapiens mRNA; cDNA DKFZp564G2222 (from clone DKFZp564G2222); partial cds PA
AK127237.1 Homo sapiens cDNA FLJ45304 fis, clone BRHIP3003984, highly similar to IkappaB kinase complex-associated protein P
NM_003640.3 Homo sapiens inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein (IKBKAP), mRNA P
AK001641.1 Homo sapiens cDNA FLJ10779 fis, clone NT2RP4000367, highly similar to IkappaB kinase complex-associated protein P
CR749385.1 Homo sapiens mRNA; cDNA DKFZp781H1425 (from clone DKFZp781H1425) PA
AB210033.1 Homo sapiens mRNA for IKBKAP variant protein, partial cds, clone: hj01659 P
AK022559.1 Homo sapiens cDNA FLJ12497 fis, clone NT2RM2001664, highly similar to IkappaB kinase complex-associated protein P
AK024223.1 Homo sapiens cDNA FLJ14161 fis, clone NT2RM2001803, highly similar to IkappaB kinase complex-associated protein P
AF153419.2 Homo sapiens IkappaBkinase complex-associated protein (IKBKAP) mRNA, complete cds PA
AK225798.1 Homo sapiens mRNA for inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein variant, clone: FCC131A09 PA
AK289962.1 Homo sapiens cDNA FLJ78012 complete cds, highly similar to Homo sapiens inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein (IKBKAP), mRNA P
BC033094.1 Homo sapiens inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein, mRNA (cDNA clone MGC:45667 IMAGE:4562340), complete cds PA
AK304742.1 Homo sapiens cDNA FLJ58234 complete cds, highly similar to IkappaB kinase complex-associated protein P

EST sequences (10 of 419) [Show all sequences]

AA962172.1 Clone IMAGE:1553475 kidney 3' read A
AA906690.1 Clone IMAGE:1521786 lung 3' read
AI039697.1 Clone IMAGE:1657985 embryonic tissue 3' read A
AI082733.1 Clone IMAGE:1652795 mixed 3' read A
AI088190.1 Clone IMAGE:1683328 parathyroid 3' read A
AI093416.1 Clone IMAGE:1695225 uterus 3' read A
AA902377.1 Clone IMAGE:1521589 lung 3' read A
AI131373.1 Clone IMAGE:1709461 heart 3' read A
BX114067.1 Clone IMAGp998F031854_;_IMAGE:754178 mixed
BX091907.1 Clone IMAGp998M213343_;_IMAGE:1326140 mixed A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help